Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0295 ATGAAGGGTGAATTAGAGTTACCCCCTGGATTCAGATTTCACCCGACGGACGAGGAGTTGGTGAATTACTATCTGTGTAGGAAATGTGCTTCTCAATCCATTGATGTTCCTATTATCAAAGAGATTGATTTGTACAAGTTTGATCCTTGGCAGCTTCCAGAAATGACGCAATACGGAGAGAAAGAATGGTACTTCTTCTCACCGAGGGACAGAAAATATCCAAACGGATCAAGACCCAACAGGGCCGCCGGAAGCGGGTACTGGAAGGCGACCGGAGTTGACAAGGCCATCGGAAAGCCTAAGCCTCTCGGAATCAAGAAGGCGCTCGTTTTCTACGCCGGTAAAGCCCCCAAAGGCATCAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGATCGCTCTGCTCGCAAGAACAACAACTTGAGGCTTGATGATTGGGTATTGTGCCGGATTTACAACAAGAAAGGTTTTGTTGAGAAATACAACACCCAGGATCAGAAATCGAGCTGGATCTTCTCAGATATCGATGAGCACGAAACTAAACCAGGAATCAACATGCTCGCCAATGACCAATTGTACATGGACACGTCGGAATCGGTGCCGCGGTTGCACCCGGACTCCAGCTGCTCCGAGCACGTGCTGTCGCCGGACGTCACGTGGTGCGACAAGGAGGTGCAGAGCGAGCCCAAGTGGAATGAGCTGGCTCTGGGATTGAAAGACGACGCCTTCGATTTCGAGTTCAATTACATGAACAATATGAACAGTAACAACTTCACAGGATATGACGCTTTTGCCTCTCAGATACAGTACCAAATGAACCAGCTTTCTCCCTTACAGGACATGTTCGTGCATCTCCAGAAACCATTTTAA 879 0.4812 MKGELELPPGFRFHPTDEELVNYYLCRKCASQSIDVPIIKEIDLYKFDPWQLPEMTQYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGVDKAIGKPKPLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSARKNNNLRLDDWVLCRIYNKKGFVEKYNTQDQKSSWIFSDIDEHETKPGINMLANDQLYMDTSESVPRLHPDSSCSEHVLSPDVTWCDKEVQSEPKWNELALGLKDDAFDFEFNYMNNMNSNNFTGYDAFASQIQYQMNQLSPLQDMFVHLQKPF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0295 292 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lele18g0295 292 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lele18g0295 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 218 - -
Lele18g0295 292 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Lele18g0295 292 FunFam NAC transcription factor 16 161 - -
Lele18g0295 292 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0295 Lele-ChrLele18 1742085 1743389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0295 1 292 NAC Transcription Factor Family AT1G01720 61.513 2.60e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele18g0295 NAM 3.9e-39 No_clan