Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0282 ATGGCTTCTGGGAAATATTCCAGATTAGACAGTAAAAGAACATCATCAAGTTACTGGTCAACAGTAACTGTTGTTACGTTTGTGGGACTATGCTTGGTTGGAGTTTGGATGATGACATCATCCTCTGTAGTTCCTGTCCAAAATGCTGATGTGTCTCAAGAGAATAAGAATGAAGTAAAGGAAAAGACTGAGTTTGAAAAACAGGTGAATGACATCAGCAAGGGCAATTCTCAGCAATTCCGAGATGATCAAGGTGATTTGCCTGTTACAACCATGGTTGAAAGTAATGTCCCTAAAAGCAATTCTAATGTCCCAGAATACACAGACAACATCAAAGAAAAGAAATCTAATTCATATCTGGATGAGAAGAAACCTTATTCCAATGGCAATCAGTTAGATGGTCCAAGTGAAACAACTGATAGTAAGATAGAAGAGAAGGTAGAACAAAGGACTATCAGTGACTCAGATGAAAGCTCTAGTGAGAAGAAAACAGATGATAATGTGCCGAACCGGAGTTCAAAGGCGGTTTATCCTTCTGGAGCACAGTCAGAGGTTCTGAAAGAAAGTAAGACTCGAATTGGTTCCTTTTCAACTCAGGCATCAGAGTCAAAGAGTGAAAAAGAGTCTCAAAATTTATCTAAGCAGCCTTCTGGTCAATACAATTGGAAACTTTGCAATGTTACTGCTGGTCCTGATTTCATCCCATGCCTTGACAACTGGCAAGCTATTAGGAGTCTCCGGACTACTAAGCACTACGAACACCGAGAAAGACATTGTCCTGCAGAAGCTCCTACCTGCCTTGTTCCTCTTCCTAAAGAATATAGAACTCCGATTGAGTGGCCTAGAAGCAGAGATAAGATATGGTATCACAATGTTCCACACACTATGCTTGCTCAATACAAGGGGCACCAGAATTGGGTAAAAATGACTGGCGAGTACCTTACTTTTCCTGGTGGTGGAACTCAGTTCCAGCACGGGGCGCTTCATTACATTGACTTTATACAACAGTCTGTTCCTGAAGTTGAGTGGGGCAAACAGACGCGTGTGGTATTAGATGTTGGATGTGGCGTTGCCAGCTTTGGAGGCTTTCTCTTTGAGAGGGATGTACTCACTATGTCATTTGCACCGAAGGACGAACACGAAGCTCAGGTCCAATTTGCACTTGAAAGAGGAATTCCTGCTATATCAGCTGTTATGGGCACAAAGAGGCTTCCCTTCCCAGGGAAAGTATTTGACGCTATCCATTGCGCACGCTGTAGAGTTCCATGGCATATAGAAGGTGGTAAGCTTCTCTTGGAGCTGAATCGAGTTTTGCGACCTGGTGGTTTGTTTTTGTGGTCTGCTACTCCTGTTTATCAGAAGGAAGAAGAAGATGTTGAAATATGGGAAGCCATGAAAGTGCTAACAAAAGGAATGTGCTGGGAAGTAGTGTCAATCCAAAGGGATAGACTCAATAAAGTGGGTATAGCTATTTACAGGAAGCCAACATCTAATAAGTGCTACATGAAACGTTCAGTGAATGAGCCCAGTCTCTGCCCTGACTTTGATGATCCTAATGCAGCATGGAACGTTCCATTACAAACTTGCATGCACAAAGCGCCCGAGAATTCAACTGAGCGTGCATATAAATGGCCAGAGGAATGGCCAGCAAGACTATCCAAACCACCATACTGGTTGTTGAGTTCCCACGTTGGAGTTTATGGAAAGCCTGCCCCTGAAGATTTTACCGCTGATTATGAAAACTGGCAAAACATAGTATCTGGGTCTTATCTAAATGGGATTGGAGTTGATTGGTCAAAAGTTAGGAATGTGATGGATATGAGATCTGTTTATGGAGGTTTTGCTGCAGCTTTGAAGGATTTAGACATTTGGGTCATGAACGTGGTTTCAATAGACGCAGCTGACACTCTTCCTATTATTTACGAACGTGGCCTTTTTGGAATATATCATGATTGGTGCGAATCATTCAGCACTTATCCTAGGAGTTATGATCTCCTCCATGCCAATAATCTGTTTTCCAAGCTTAAGAAGAGTTGCAATTTGACAGGTGTGGTTGCTGAGGTTGATCGGATTCTGAGGCCAGGTGGAAAGTTTCTGGTTCGCGACAAATCTGACATGATTAAGGAAATTAAAGGGATGGTGACGTCTTTGCATTGGAAAATTCTCACGAGTCATTCTAACGATAAGAATGGATTTCTATGCGCCCAGAAGTCTACTTGGAGGCCTAAGAAGAAGGAGACACTCGTGTATGCTCTTGCTTTTAGTAAAGATCTTCAACGTGATCAAGATATCGATAAGATCATTCATCATACTTTGGATTTGGTTACTGATGTGGTCATTGTAACCAATAATATTAAGCTTCATACAATACCACTCAATCTCTCTAAGATCATGGAAGATGAGAGCCACAACAATTTGCCAAATGGGATCATTACAGAAAGCCCTGAAAGTCCCACCTTAAAGACATCAAGCAACAACAACGTTAACAACAACAACAAAGAACAAGATCGCTTTCTCCCCATAGCCAATGTGGGAAGAATCATGAAGAAAGTGATGCCTCCGAATGGGAAAATCTCAAAGGACGCTAAAGAGACACCTCCCTATGTGCCTGCTGGCCAGCCATATGCTCTACCTTTCTCCCCAAATTCTATCAAACAGGACCAGATTGATTCAGTGGGACACTGGATACTTACTTGTACTGCATTTGTGAGAGTGTGA 2718 0.4227 MASGKYSRLDSKRTSSSYWSTVTVVTFVGLCLVGVWMMTSSSVVPVQNADVSQENKNEVKEKTEFEKQVNDISKGNSQQFRDDQGDLPVTTMVESNVPKSNSNVPEYTDNIKEKKSNSYLDEKKPYSNGNQLDGPSETTDSKIEEKVEQRTISDSDESSSEKKTDDNVPNRSSKAVYPSGAQSEVLKESKTRIGSFSTQASESKSEKESQNLSKQPSGQYNWKLCNVTAGPDFIPCLDNWQAIRSLRTTKHYEHRERHCPAEAPTCLVPLPKEYRTPIEWPRSRDKIWYHNVPHTMLAQYKGHQNWVKMTGEYLTFPGGGTQFQHGALHYIDFIQQSVPEVEWGKQTRVVLDVGCGVASFGGFLFERDVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGKVFDAIHCARCRVPWHIEGGKLLLELNRVLRPGGLFLWSATPVYQKEEEDVEIWEAMKVLTKGMCWEVVSIQRDRLNKVGIAIYRKPTSNKCYMKRSVNEPSLCPDFDDPNAAWNVPLQTCMHKAPENSTERAYKWPEEWPARLSKPPYWLLSSHVGVYGKPAPEDFTADYENWQNIVSGSYLNGIGVDWSKVRNVMDMRSVYGGFAAALKDLDIWVMNVVSIDAADTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHANNLFSKLKKSCNLTGVVAEVDRILRPGGKFLVRDKSDMIKEIKGMVTSLHWKILTSHSNDKNGFLCAQKSTWRPKKKETLVYALAFSKDLQRDQDIDKIIHHTLDLVTDVVIVTNNIKLHTIPLNLSKIMEDESHNNLPNGIITESPESPTLKTSSNNNVNNNNKEQDRFLPIANVGRIMKKVMPPNGKISKDAKETPPYVPAGQPYALPFSPNSIKQDQIDSVGHWILTCTAFVRV 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0282 905 MobiDBLite consensus disorder prediction 70 107 - -
Lele18g0282 905 Gene3D Vaccinia Virus protein VP39 322 487 IPR029063 -
Lele18g0282 905 MobiDBLite consensus disorder prediction 54 69 - -
Lele18g0282 905 MobiDBLite consensus disorder prediction 49 216 - -
Lele18g0282 905 FunFam probable methyltransferase PMT23 322 506 - -
Lele18g0282 905 MobiDBLite consensus disorder prediction 122 137 - -
Lele18g0282 905 CDD AdoMet_MTases 350 445 - -
Lele18g0282 905 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 232 734 IPR004159 GO:0008168
Lele18g0282 905 MobiDBLite consensus disorder prediction 811 833 - -
Lele18g0282 905 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 533 702 IPR029063 -
Lele18g0282 905 Coils Coil 48 68 - -
Lele18g0282 905 MobiDBLite consensus disorder prediction 170 216 - -
Lele18g0282 905 Gene3D Histone, subunit A 827 865 IPR009072 GO:0046982
Lele18g0282 905 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 256 507 IPR029063 -
Lele18g0282 905 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 838 865 IPR003958 -
Lele18g0282 905 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 22 741 IPR004159 GO:0008168
Lele18g0282 905 SUPERFAMILY Histone-fold 828 865 IPR009072 GO:0046982
Lele18g0282 905 MobiDBLite consensus disorder prediction 138 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0282 Lele-ChrLele18 1666775 1674282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0282 809 865 CCAAT-HAP3 Transcription Factor Family AT2G13570 71.930 1.02e-13 69.7