Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0273 ATGATAGTCGTGGGTACGAGTTTAAGGTTTGTTACAGCGGTTCACGGAAATTATAGCTGCAAAAGAAGAGCATTAATCACCCAATTGAAGGCAAAACACTGCTTAGCTCAAGGAATTAAAATGTCCAGAAGCAGTGGCAGTGAGAATAAGAGCTGCAACAGAGGCCATTGGAGACCAGCTGAAGATGAGAGACTGAAACAGCTTGTGCAGCAGTACGGTCCCCAGAACTGGAATTTCATTGCAGAACATCTTGAAGGGAGATCAGGGAAAAGTTGCAGATTGAGGTGGTACAACCAACTAGACCCAAACATAGTGAAAAGGCCATTCACAGAGGAGGAAGAAGAAATACTGCTAGCTCTTCACAAGGTAAAGGGAAACAAATGGGCTGCAATTTCAAGGTTCTTGCCTGGAAGAACTGATAATGCTGTGAAGAATCACTTCCATGTCCTTATGGCAAGAAGAAAGAGAGAACGTTACTCACTCTTTGGTGACAGAAGCAGTAATCATAATCATATTCCTATACATAGGCCTACCTCAGGGATAATTAATAACTTCACCTTCCAAAACAACAGAAACTACTTGGGACTGAATCCTTGGAATACTCGAAGTGATACTTCTTTTTCGACCATCTCATCAGAGTTACTGAGTTTTGAAGCTTCTGGGGGTGCTTCTTGTTCGCTTGGCAGTTATAGTAGTTTCACTGCCCCAGGAGTTCCCAGCATTGGTAAGGTCGTCCCTCTTCTTCCTCAGAGGTTCTCAAAATCCTATTTTGCCCAAAGAACTGAGGATTATTCTTCCATCAAAGGCATGACAGACATGATTATTCTGGAAGAACAAGTTGAAAAACTCAAGGATGTTTCCTTTATAGACTTTCTTGGCGTGGGAAGTTGTTCTGCCAGCGACAGTTGA 909 0.4268 MIVVGTSLRFVTAVHGNYSCKRRALITQLKAKHCLAQGIKMSRSSGSENKSCNRGHWRPAEDERLKQLVQQYGPQNWNFIAEHLEGRSGKSCRLRWYNQLDPNIVKRPFTEEEEEILLALHKVKGNKWAAISRFLPGRTDNAVKNHFHVLMARRKRERYSLFGDRSSNHNHIPIHRPTSGIINNFTFQNNRNYLGLNPWNTRSDTSFSTISSELLSFEASGGASCSLGSYSSFTAPGVPSIGKVVPLLPQRFSKSYFAQRTEDYSSIKGMTDMIILEEQVEKLKDVSFIDFLGVGSCSASDS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0273 302 CDD SANT 57 98 IPR001005 -
Lele18g0273 302 Gene3D - 54 105 - -
Lele18g0273 302 Gene3D - 107 172 - -
Lele18g0273 302 SUPERFAMILY Homeodomain-like 53 147 IPR009057 -
Lele18g0273 302 ProSiteProfiles Myb-like domain profile. 101 151 IPR001005 -
Lele18g0273 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 104 IPR017930 -
Lele18g0273 302 Pfam Myb-like DNA-binding domain 106 150 IPR001005 -
Lele18g0273 302 Pfam Myb-like DNA-binding domain 54 100 IPR001005 -
Lele18g0273 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 155 IPR017930 -
Lele18g0273 302 FunFam MYB transcription factor 54 105 - -
Lele18g0273 302 PANTHER MYB PROTEIN-RELATED 54 188 - -
Lele18g0273 302 SMART sant 53 102 IPR001005 -
Lele18g0273 302 SMART sant 105 153 IPR001005 -
Lele18g0273 302 CDD SANT 116 151 IPR001005 -
Lele18g0273 302 ProSiteProfiles Myb-like domain profile. 49 100 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0273 Lele-ChrLele18 1613980 1616871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0273 39 298 MYB Transcription Factor Family AT4G33450 47.653 1.63e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele18g0273 Myb_DNA-binding 4.2e-16 CL0123