Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0264 ATGATGCCGGGATTTCGGGTTCATACGACTGACGTTGAGCTGGTTCAGTACTTTTTGAAGAGGAAGGTCATCGGGAAAAAGTTTCCCGTTGAAGTGATTGCCGAAGTCGACATGTACCAATACGCTCCGTGGGATCTCCCAGATAAATCTTTAATGAGCAGGGAGGATTTGGAATGGTATTTCTTTTGCCCTAGAGCAAAGAAATACGGCATTGGAAGTAGAATGATGAATAGGAGTACGAAAATTCTAGTGTTTCACATGGGTCGACCACCTAGAGGACATCGAACTGGCAGGGTTATGCATGAATTTAGGCTTCTCGCTGACAAAGACGACACCGCGCAGGAGGAGTCGTATGTGGTTTGTAGGGTGTTCAAGAAGGATGGTCGTGGCCGTAGGAATGGTGGACAATATGGTAAACTGTTGGACGAGGAAAACTGGGATGATGATGAGGAGGAGGAAGATAAAATTGATGATGATCACTCAAAGTCAAGTTTGTCATCAGGAGCGACTCATGCTTCAGTTGTGAATACAGATGTTTCTCAAATTGCATTTAGTGATGACGATGATGTGTCATGCTCGTTTTGGATTACGGATGCTAACTCTGAAGAGAAAAAACAAAGTGAGAACATTCCATTGGATGATATTTCAATTTTGGGGACTTGTCTGCACTGGATGAAGATTTCACTGCTGATCTCTCCTTCTGCTTATGTCAATTGA 717 0.4351 MMPGFRVHTTDVELVQYFLKRKVIGKKFPVEVIAEVDMYQYAPWDLPDKSLMSREDLEWYFFCPRAKKYGIGSRMMNRSTKILVFHMGRPPRGHRTGRVMHEFRLLADKDDTAQEESYVVCRVFKKDGRGRRNGGQYGKLLDEENWDDDEEEEDKIDDDHSKSSLSSGATHASVVNTDVSQIAFSDDDDVSCSFWITDANSEEKKQSENIPLDDISILGTCLHWMKISLLISPSAYVN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0264 238 Pfam No apical meristem (NAM) protein 3 80 IPR003441 GO:0003677|GO:0006355
Lele18g0264 238 ProSiteProfiles NAC domain profile. 1 168 IPR003441 GO:0003677|GO:0006355
Lele18g0264 238 SUPERFAMILY NAC domain 2 126 IPR036093 GO:0003677|GO:0006355
Lele18g0264 238 Gene3D NAC domain 80 129 IPR036093 GO:0003677|GO:0006355
Lele18g0264 238 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 80 - -
Lele18g0264 238 Gene3D NAC domain 10 79 IPR036093 GO:0003677|GO:0006355
Lele18g0264 238 MobiDBLite consensus disorder prediction 134 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0264 Lele-ChrLele18 1571174 1572373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0264 1 172 NAC Transcription Factor Family AT5G64060 45.320 2.68e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele18g0264 NAM 5.5e-18 No_clan