Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0259 ATGGATATCAACCAAAACCCTACCATGTTCACAAGCGTTAACAATACCACTTGGAATCTGGACAATATGGAAATGGATCATCACAGCAATCTACATCATCATCAAATCCGTATGTGTTCTTCTTGGCCTAACTACCCTAATTACCCTCATCAGATAATACCATCTTCTTCGGCGTCCGCCACAATTGTACCCTCTTCAGGGTTTCTAAACAACGTCTTGTTGGAGGAAGATGAAGAGAGAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAGCTGGGAGCAGTGAAAGAGATGATGTACAAGATCGCTGCTATGCAGCCGGTGGACATAGACCCAGTCACCATACGAAAGCCAAAGAGGCGAAACGTCAGAATCAGCGACGATCCACAAAGCGTCGCCGCGAGACACAGGAGAGAGAGGATCAGCGAGAAAATCCGAATCCTCCAAAGACTCGTCCCTGGTGGCACCAAGATGGACACTGCCTCCATGCTCGACGAAGCCATTCGCTATGTCAAGTTCTTAAAGCGACAAATCAGGTTGCTCCAATCTCAACCCTCACCCTCACAACCACCACAATGCATCACTAACACTACTCTTGCCAATATTGGGGTTAACAACCCTGCTACTTCTAATATTCATAGCGATTACTGGCCTTTTGCACCACCGTCTTTACTACACTGTCCCACCACCACCACCACCACCACCACCACCTCCGCCGCCGCCGCCGCCGCCATGGGCATGCCGGTCAGACTGGGACTTGGCTCCGGCTATAGCCATGAGTCATGA 789 0.4994 MDINQNPTMFTSVNNTTWNLDNMEMDHHSNLHHHQIRMCSSWPNYPNYPHQIIPSSSASATIVPSSGFLNNVLLEEDEERGGGGGGEEEEEELGAVKEMMYKIAAMQPVDIDPVTIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSQPSPSQPPQCITNTTLANIGVNNPATSNIHSDYWPFAPPSLLHCPTTTTTTTTTSAAAAAAMGMPVRLGLGSGYSHES 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0259 262 SMART finulus 132 181 IPR011598 GO:0046983
Lele18g0259 262 Coils Coil 165 185 - -
Lele18g0259 262 FunFam BHLH transcription factor 129 191 - -
Lele18g0259 262 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 14 210 IPR045843 GO:0003700|GO:0006355
Lele18g0259 262 Gene3D - 129 190 IPR036638 GO:0046983
Lele18g0259 262 Pfam Helix-loop-helix DNA-binding domain 136 175 IPR011598 GO:0046983
Lele18g0259 262 CDD bHLH_AtIND_like 127 182 - -
Lele18g0259 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Lele18g0259 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 188 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0259 Lele-ChrLele18 1542383 1543171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0259 93 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 86.000 1.35e-46 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele18g0259 HLH 1.3e-06 No_clan