Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0256 ATGAAGCAAAGGCAGTCCCAAGAACAGGCGAGGAGGAAGAAGATGTCAAGGGCTCAAGCTGGGATCTTGAAGTACATGCTAAAGATGATGGAGGTTTGCAAGGCTCAAGGATTCGTTTATGGGATAATTCTGGAGAGGGGAAAACCTGTGACCGGGGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAAGTCAGATTCGATAGGCACGGCCCCGCTACCATAGCAAAATATCAGGCTGATAACGCGATTCTGGGCAAGAACGATGGATGCAATTCTCTTGGGGTTCTCGGGGATGGATTCATGGCGAATAATCTGATGATCCGAAACACGGCAGGACCCGATGCTCACCAAGCAGTAGACTTCAGATCAGACAGCGACCTCTCTGTTCTGGAAAACATCGAATTCATGGGGAATGAAGACACTTTATATGCTCATTCCCTTCGTCAATTCTACATATCATGTCTCATCCAAGGCAACGTAGACATGATCTTCGGCAACGCGGCCGCGTTTTTCCAGGAGTGCGCTATCCTATCGAGTCCAAGACAGAACGACCTGGAAACATGGGAGACCAATGCGGTGACGGCGCATGGGAGAACAGACCCAGCGCAATCCACAGGCTTTGTATTTCATAAGTGCGCGGTGACTGGGACCAAGGAGTACATGGAACAGTACAGGAAGAAGCCAGAGGTGCACAAGAACTTCTTGGGTAGGCCATGGAAATTGTATTCAAGAACGGTGTTCATTCACTCTGTGTTGGAAGTTATCATCTCGCGGGAGGGAGGGATGGCCTGTGACGGTGATTTGGGTCTGGACACACTTTACTATGGGGAGAGTAACAATGCTGGTCCCGGTTCTGATCGGAGTCGGAGAGTGGCCTGGAGTAGTGAAATTCCCCGCCGACATGTGTAG 912 0.5 MKQRQSQEQARRKKMSRAQAGILKYMLKMMEVCKAQGFVYGIILERGKPVTGASDNLREWWKDKVRFDRHGPATIAKYQADNAILGKNDGCNSLGVLGDGFMANNLMIRNTAGPDAHQAVDFRSDSDLSVLENIEFMGNEDTLYAHSLRQFYISCLIQGNVDMIFGNAAAFFQECAILSSPRQNDLETWETNAVTAHGRTDPAQSTGFVFHKCAVTGTKEYMEQYRKKPEVHKNFLGRPWKLYSRTVFIHSVLEVIISREGGMACDGDLGLDTLYYGESNNAGPGSDRSRRVAWSSEIPRRHV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0256 303 Gene3D - 50 301 IPR012334 -
Lele18g0256 303 PANTHER PECTINESTERASE 94 295 - -
Lele18g0256 303 MobiDBLite consensus disorder prediction 280 303 - -
Lele18g0256 303 Pfam Ethylene insensitive 3 2 91 IPR006957 GO:0005634
Lele18g0256 303 SUPERFAMILY Pectin lyase-like 84 295 IPR011050 -
Lele18g0256 303 Pfam Pectinesterase 93 296 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0256 Lele-ChrLele18 1519701 1521645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0256 93 303 Carbohydrate Esterase AT5G09760 65.877 1.17e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lele18g0256 Pectinesterase 7.2e-74 CL0268