Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0246 ATGAGTGGGATGGATTATGAGTTAGTTGATCCCTACTTCTGCCCCTCCCACATGTATCAACTCCATGAATATACCTTAGAAAATGCATTTCCATTTCAAACAGAATATGATCTCTTATCTCCAAATACCTCCAAAGATGCAATGCTCGACCAAGAGTTTATTGAAGGATTACTGCAGCAGCCACATACGGAGCTTCTGGACTTTGATTTCATGGATCCTGATGTCTCCGTGGGGATGGAGACAGAATTGAGCCAAGAAGTTACTACTCCGAGATGTCAGGAAAATGGCGATCCTTGTTTAATGGGAATTCAAGCGGCGCTAATGGAAGATAGCAGTTTAACTGATCTCTTGCTGACAGGAGCTGAAGCTGTTGAAGCACAGAACTGGGCTCTAGCCTCAGACATCATTAAGAAGATTAACGATGACTTGTGTGTAAAAAATGGAGATAGTTTATTGAACAGGTTGGCTCTTTTCTTCACTCAAGGTTTGCATTATAAAACCATAAATGCTCCTGCAGTGAACTATGAACCTGTTTCTACCCAGACAAACACTTTGTTCACTGTTCATATCCTCCAGGAGGTCTCTCCCTATGTGAAATTTGCTCATTTCACAGCCAACCAAGCGATCTTTGAAGCCACTGAAGATGATAGAGAGATCCATGTCATTGATTTTGACATCATGGAGGGAATCCAGTGGCCGCCTTTGATGGTTGACCTGGCAATGAGGGAAAACACTACCCTTAGAGTAACAGCCATCACGTTGGACCATCAAAGTGCCGCCGCCGTCCAACAAACGGGAAGAAGGTTACAAGAGTTTGCTGCCTCTATCAATTTCTCATTCACGTTCGATCAAATAATGATTACTGGGGAAGAAGATTTTCGAAGAATCATATTGGGTCCTACGCTTATAGTCAATTGTATGATACACCAGGGGATGCCCAACAGGAGTTTCTCGCTGATAAAAACTTTTCTGGATGGAGTAAGCAAATTATCACCTAAGTTTGTTATTTTAGTAGAAGATGAACTATTCAATTTTTCTAGGCTCAAATCTATGTCCTTTGTGGAGTTCTTCTATGAGGCTTTGCTCCATTATACAGCAATTTATGATTCACTTGCAAGTAGTTTCTGGGATGACCAAAAGATGAAGTTGATAGAAAAGGATTTTCTGGGGATGAGGATTATAGACAGTGTGAGGCAGTTTCCATGTGCAAGGGAGAAGAGAACTCTGTGGGAAGAAGGATTGAATTACTTGAAAGGGTTTAAACGAGTTCCTGTGAGTAGCTGCAATATTTCTCAAGCCAAGTTCTTGGTAAGCCTCTTCGGTGGGGGTTATTGGGTGCAATATGACAGGCTTAGATTGTCCGTGTGTTGGAAGTCCAGGCCTTTAACAGCGGCTTCAATTTGGGTACCGACAAGAAGTGAAGGTGTCCAAGTGACAAGGCCGAAACGATTGGACTTCTTGTTTTAG 1467 0.4226 MSGMDYELVDPYFCPSHMYQLHEYTLENAFPFQTEYDLLSPNTSKDAMLDQEFIEGLLQQPHTELLDFDFMDPDVSVGMETELSQEVTTPRCQENGDPCLMGIQAALMEDSSLTDLLLTGAEAVEAQNWALASDIIKKINDDLCVKNGDSLLNRLALFFTQGLHYKTINAPAVNYEPVSTQTNTLFTVHILQEVSPYVKFAHFTANQAIFEATEDDREIHVIDFDIMEGIQWPPLMVDLAMRENTTLRVTAITLDHQSAAAVQQTGRRLQEFAASINFSFTFDQIMITGEEDFRRIILGPTLIVNCMIHQGMPNRSFSLIKTFLDGVSKLSPKFVILVEDELFNFSRLKSMSFVEFFYEALLHYTAIYDSLASSFWDDQKMKLIEKDFLGMRIIDSVRQFPCAREKRTLWEEGLNYLKGFKRVPVSSCNISQAKFLVSLFGGGYWVQYDRLRLSVCWKSRPLTAASIWVPTRSEGVQVTRPKRLDFLF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0246 488 Pfam GRAS domain family 114 468 IPR005202 -
Lele18g0246 488 ProSiteProfiles GRAS family profile. 104 469 IPR005202 -
Lele18g0246 488 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 97 464 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0246 Lele-ChrLele18 1466804 1468270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0246 191 468 GRAS Transcription Factor Family AT1G55580 33.660 7.21e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele18g0246 GRAS 1.1e-72 CL0063