Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0227 ATGTCAAAGGTGGCGAATCTGAGAGACGAGGCAAAGGAAGAAGGTGAACACACAAGCAATCCCTTGACGTCTATGACGATGATATTTCCAGATATTGATAGGGAGAAGGAGATGTCTGCTATGGTTTCAGCTTTGACCCAAGTTGTATCCGGAGCGGTGCACTCTGATTATACGGATTTTCATCACTACTCAACGTACCTGAATACAGTTGAAGCTTCTGCGGCACCGTCTTCGTCTTCTCCATTCTATGGTACTAGTTCTGCTGTAACATTGTGCATGGAAGATGGCACATTCTCACAGAGAGGTTCATCTTCATCCCCTGCTGTTCCAACAAAAAGAGAAGGGAGGAGCGGAAGAAACGAAATGGGGGAAGTGAGGCATGCAGTGTATGAATACAGAGCAGAGAACAGGAGGGAGCAGGGTAGAAGAAAGTACAGAGGAGTGAGACAGAGGCCATGGGGGAAGTGGGCTGCGGAGATCAGAGACCCGTTCAAAGCAGCGAGGGTGTGGTTAGGCACATTTGACACAGCAGAAGCCGCCGCCAGAGCATACGACAAAGCTGCCCTGCGTTACAGAGGCAACAAGGCTAAGCTCAACTTCCCTGAAAATGTGACCCTACGTCCCCCAACCCCAGACCTTCACAGCTACGCTCAGATAGATCACATGGTTCCCCATCTTCAACCATCCCTAACGACGCCGGCTGCGTCGTCGTCCCCCTCGTTTTCTGCCTTTGCCTCCTCTGTTACTACACTTCCTTCGCTCTATCCTACACAGACTCAAATAAGTGATTCTGAGTATTTAGTGCATTCATCGTTTTCTTCTGCCGGTTACTCCTTTTATTCCGGATGA 849 0.4935 MSKVANLRDEAKEEGEHTSNPLTSMTMIFPDIDREKEMSAMVSALTQVVSGAVHSDYTDFHHYSTYLNTVEASAAPSSSSPFYGTSSAVTLCMEDGTFSQRGSSSSPAVPTKREGRSGRNEMGEVRHAVYEYRAENRREQGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDKAALRYRGNKAKLNFPENVTLRPPTPDLHSYAQIDHMVPHLQPSLTTPAASSSPSFSAFASSVTTLPSLYPTQTQISDSEYLVHSSFSSAGYSFYSG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0227 282 MobiDBLite consensus disorder prediction 97 111 - -
Lele18g0227 282 SMART rav1_2 144 207 IPR001471 GO:0003700|GO:0006355
Lele18g0227 282 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Lele18g0227 282 PRINTS Ethylene responsive element binding protein signature 167 183 IPR001471 GO:0003700|GO:0006355
Lele18g0227 282 Pfam AP2 domain 144 193 IPR001471 GO:0003700|GO:0006355
Lele18g0227 282 MobiDBLite consensus disorder prediction 1 24 - -
Lele18g0227 282 FunFam Ethylene-responsive transcription factor 2 143 202 - -
Lele18g0227 282 MobiDBLite consensus disorder prediction 1 17 - -
Lele18g0227 282 Gene3D AP2/ERF domain 143 203 IPR036955 GO:0003700|GO:0006355
Lele18g0227 282 ProSiteProfiles AP2/ERF domain profile. 144 201 IPR001471 GO:0003700|GO:0006355
Lele18g0227 282 PANTHER DNA-BINDING DOMAIN 106 234 IPR044808 GO:0003700|GO:0009873
Lele18g0227 282 MobiDBLite consensus disorder prediction 97 120 - -
Lele18g0227 282 CDD AP2 144 203 IPR001471 GO:0003700|GO:0006355
Lele18g0227 282 SUPERFAMILY DNA-binding domain 144 202 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0227 Lele-ChrLele18 1343719 1344825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0227 142 208 AP2-EREBP Transcription Factor Family AT2G33710 79.104 8.13e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele18g0227 AP2 5.9e-15 CL0081