Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0218 ATGGACTACTATTTTGGAAACCCTAATCATTCACAATTCTCTGCAGCAAATCCGTCCTCGTCTGATCAGTTCATTTCGGATTATTTGGTGCTTGATAATGGTGTTGGGCATCAAGAATCCTGGTCACACAGCACAGAATCATCGGAGAAGGCAACTAGCGATGCCAGTGGATTTAGTGCTGCTACTGATGCTACCTCGTCTCAGAATAACAACAAAAAATGCAAAAATGAGATGAAACGAAACAAGCCGGGGGAGATGAGTCGAAGGATCGCGTTCAGAACCAGATCGGAGCTTGAGGTTATGGATGATGGGTACAAATGGAGGAAGTACGGAAAGAAGTCAGTGAAGAATAGTCCGAATCCCAGGAACTACTACAAGTGTTCATATGGAGGATGCAGTGTGAAGAAGAGGGTGGACAGGGACAGGAATGATTCGAGCTACGTGATAACAAGTTATGAAGGAGTTCACAACCACGAGATCCCAAGTGCTACCTACTCCTCCTCCTTCGTCCATCCTAATCCTTTGCCCTTTCACTCTTCTGCAAATTCCTCATCTTCCTAG 561 0.4528 MDYYFGNPNHSQFSAANPSSSDQFISDYLVLDNGVGHQESWSHSTESSEKATSDASGFSAATDATSSQNNNKKCKNEMKRNKPGEMSRRIAFRTRSELEVMDDGYKWRKYGKKSVKNSPNPRNYYKCSYGGCSVKKRVDRDRNDSSYVITSYEGVHNHEIPSATYSSSFVHPNPLPFHSSANSSSS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0218 186 Gene3D WRKY domain 86 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele18g0218 186 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele18g0218 186 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele18g0218 186 FunFam WRKY transcription factor 57 87 161 - -
Lele18g0218 186 MobiDBLite consensus disorder prediction 73 88 - -
Lele18g0218 186 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele18g0218 186 MobiDBLite consensus disorder prediction 38 88 - -
Lele18g0218 186 MobiDBLite consensus disorder prediction 38 72 - -
Lele18g0218 186 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 178 IPR044810 GO:0003700
Lele18g0218 186 MobiDBLite consensus disorder prediction 1 20 - -
Lele18g0218 186 SUPERFAMILY WRKY DNA-binding domain 93 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0218 Lele-ChrLele18 1288845 1290279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0218 8 170 WRKY Transcription Factor Family AT5G64810 46.821 1.15e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele18g0218 WRKY 2.1e-22 CL0274