Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0206 ATGAATTCCGTACCGAACTTCTCTGTTGCGGTTTTCTCCCTTTGTTTCCTTTCTATGCTCTTCTCGGGCTTTGCCTCTGAAGCTGAACTCCGATCTTTGCTTGAATTCAAGAAAGGGATTGAAAGAGATCCGATTGGAAGAGTTTTCGACTCATGGAAGCTGTCTTCACTCAGCGACCTCAACGAATGTCCTCATTCCTGGGCTGGAGTTGCCTGCGAAGAGGGAACCGGCAACGTCACCGCCGTAGTCCTTGATAGGCTTAGTTTGGGAGGCGAGCTGAAATTTCACACTCTACTTGAACTCAAGATGCTAAGGAATCTCAGCCTCTCCGGAAATGACTTTACTGGGCGGCTGCCTCCGGCATTGGGGACATTGACCACTCTGCAGCATTTGGATCTTTCCGACAACAAGTTCTACGGGCCGATCCCTGCTCGAATTAATGACCTTTGGGGATTGAATTACCTCAATTTGTCTAAGAACAACTTCAAGGGTGGGTTTCCGGGAGGGATATATAATCTTCAGCAGCTCAGAGTGCTGGATTTGCGTTCGAATGAGCTTTGGGGTGATATTGGCGATGTATTGTCCGCATTGCGAAATGTGGAGCATCTTGATTTGAGCTCTAATAAGTTCTACGGGGGACTCTCGGTTGGGGCGGAGAATGTTTCTGGCTTGGCAAATACGGTCCATTTTCTAAATTTGAGTTACAACGAATTAAATGGCCCCTTCTTTGTGGGTGATTCAATTGCTTTGTTTCGGAATTTGCAAGTTTTGGATTTGGGTCACAATCAGATCAGGGGGGAGCTTCCCTCTTTTGGGTCACTGCCGAGTCTTCGAGTTTTGCGACTTGACACCAATCTATTATTTGGGTCAATTCCGGAGGAGTTGTTTGAAACTTCTATGTCGTTAGAAGAATTGGATCTTAGCGGCAACGGGTTTACGGGTTCAATTCCTTCAATCAACTCGACATCTTTGAATATTTTGAATATTTCATCAAATGGTTTATCAGGCTCTTTGCCAACATCTTTGAGAAAATGCGCCGTGCTGGACTTAAGCAGGAATATGTTAGATGGTGATGTATCTGTTATGCAGAGCTGGGAAGCCACATTTGAGGTTCTTGATCTGAGTTCAAACAGGCTGTCAGGAAGCTTTCCCAATCTGACAAATCAGTTTCAGGGATTAACCACACTCTCTCTCAGGAATAATTCCTTAGTGGGAACTTTGCCTCCTAATTTGGGGACCTATTCTAAATTGTCCATGGTTGATTTCAGTTTGAATGAACTTAGTGGCCCTATTCCTGTTAGTTTATTTGCTTCAACAGCATTGACAAGCCTGAACCTTTCTGGAAATCATTTTACCGGGTCAATTCCTCTTGGAAGCTCAGGAGCCAGCGAATTAATAATTATGACACCTTATCAGCCAATGGAATATCTTGATTTATCTAATAACTCCTTAAAAGGTATCTTACCTTCTGACATAAGTAGGATGGGTGGGCTCAAACTGTTGAATCTTGCCGGGAATGATTTTTCAGGACAGCTGCCCAATGAATTGAGCAAACTTTTTAATTTGGAGTACCTTGATTTGTCTAATAATAGATTTAAGGGACAAATTCCTGATAAGCTTTCACCCAACTTGAATCTGTTTAATGTGTCCAATAATGATTTATCTGGTGATGTTCCAGTTAATTTGAGGAGGTTTCCTCCTTCATCGTTTCACCCTGGAAATCAAAAGCTGAACCTTCCAGATTATACTAATGGAGCTTCAGTGCCTGATAATATTTATGGTCATGGGAAACGTCATAGTTCAAAGGGAAATATCAAGATAGCCATTATTCTTGCTGCAGTTGGTGCTGCTGTGATGATTGTTTTTGTTTTCTTGGCTTATCATAGAACACAACTTAAAGAATTCCGAGGCCGAAGTGGGTTCGCTGGTCAAAATACTGGAAGGGATATCAAATCAGGAGGAGTTGCACGGCCTTCCCTATTCAAGTTCCACCCCACTCAGCCACCAACAAGTTCATTGAGCTTTTCAAATGATCACTTGCTGACGTCCAATTCAAGATCACCCTCTGGACCGTCGGAGTTTGTAACTGAAATTACTGAGCATGGCTTAGCTCAGGGATCGGGAGCAGCTAGTTCAGCTTCTGTAAATCCCGATTTGATGGATTCCCCATTATCTTCCTCCCCCCGTTTTATAGAAGCACATGAAAAACCAGTTATGTTGGATGTGTATTCACCGGATCGCCTGGCTGGAGAGTTGTACATCCTTGATTCTTCCCTGGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCGGAAGTTCTTGGCAGAAGTAGCCATGGTACTTTATACAAAGCTACACTAGACAGTGGCCATATGTTGACTGTAAAGTGGTTACGTGTTGGATTGGTCAAACATAAGAAGGAATTTGCAAGAGAAGTTAAAAGGATTGGTTCTATGAGACATGCTAACATTGTCCCATTGCGGGCATACTATTGGGGGCCCAGGGAACAAGAGAGGCTTCTTCTAGCTGACTATATACCTGGCGACAGCTTGGCCTTACATCTTTATGAGACAACACCTCGAAGGTACTCACCATTATCATTCAGCCAGAGAGTAAGAGTTGCTGTTGAAGTTGCTCAATGTCTTTTATACCTTCATGATCGAGGGCTTTCCCATGGAAATCTAAAACCAACAAATATATTATTAGCAGGCCCTGAATACAGTGCACGTCTGACTGACTATGGTCTGCACCGCCTCATGACGCCTGCTGGAATTTCAGAGCAGATACTAAATCTCGGAGCACTCGGATACCGTGCTCCAGAACTCGCCTCTGCGAATAAACCAGTCCCATCATTCAAGGCAGATGTGTATGCCCTTGGTGTGATCTTAATGGAATTATTAACAAGAAAAAGTGCAGGCGACATAATATCAGGGCAATCCGGGGCTGTGGATCTAACAGATTGGGTTAGGCTTTGTGAGCAAGAAGGACGTGTAATGGACTGTATTGACAGAGACATTGCAGGCGGTGAAGAATCTTCCAGAGAGATGGACGAATTGCTTGCAATATCACTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAATATCAGACAAGTTTTTGACGATCTTTGTTCTATATCAGCTTGA 3147 0.4369 MNSVPNFSVAVFSLCFLSMLFSGFASEAELRSLLEFKKGIERDPIGRVFDSWKLSSLSDLNECPHSWAGVACEEGTGNVTAVVLDRLSLGGELKFHTLLELKMLRNLSLSGNDFTGRLPPALGTLTTLQHLDLSDNKFYGPIPARINDLWGLNYLNLSKNNFKGGFPGGIYNLQQLRVLDLRSNELWGDIGDVLSALRNVEHLDLSSNKFYGGLSVGAENVSGLANTVHFLNLSYNELNGPFFVGDSIALFRNLQVLDLGHNQIRGELPSFGSLPSLRVLRLDTNLLFGSIPEELFETSMSLEELDLSGNGFTGSIPSINSTSLNILNISSNGLSGSLPTSLRKCAVLDLSRNMLDGDVSVMQSWEATFEVLDLSSNRLSGSFPNLTNQFQGLTTLSLRNNSLVGTLPPNLGTYSKLSMVDFSLNELSGPIPVSLFASTALTSLNLSGNHFTGSIPLGSSGASELIIMTPYQPMEYLDLSNNSLKGILPSDISRMGGLKLLNLAGNDFSGQLPNELSKLFNLEYLDLSNNRFKGQIPDKLSPNLNLFNVSNNDLSGDVPVNLRRFPPSSFHPGNQKLNLPDYTNGASVPDNIYGHGKRHSSKGNIKIAIILAAVGAAVMIVFVFLAYHRTQLKEFRGRSGFAGQNTGRDIKSGGVARPSLFKFHPTQPPTSSLSFSNDHLLTSNSRSPSGPSEFVTEITEHGLAQGSGAASSASVNPDLMDSPLSSSPRFIEAHEKPVMLDVYSPDRLAGELYILDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHANIVPLRAYYWGPREQERLLLADYIPGDSLALHLYETTPRRYSPLSFSQRVRVAVEVAQCLLYLHDRGLSHGNLKPTNILLAGPEYSARLTDYGLHRLMTPAGISEQILNLGALGYRAPELASANKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSREMDELLAISLRCILPVNERPNIRQVFDDLCSISA 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0206 1048 FunFam Nuclear pore complex protein NUP107 26 192 - -
Lele18g0206 1048 ProSiteProfiles Leucine-rich repeat profile. 301 323 IPR001611 GO:0005515
Lele18g0206 1048 PRINTS Leucine-rich repeat signature 519 532 - -
Lele18g0206 1048 PRINTS Leucine-rich repeat signature 474 487 - -
Lele18g0206 1048 FunFam Pollen receptor-like kinase 1 846 1048 - -
Lele18g0206 1048 Gene3D Ribonuclease Inhibitor 25 215 IPR032675 -
Lele18g0206 1048 FunFam Leucine-rich repeat receptor-like protein kinase 753 845 - -
Lele18g0206 1048 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Lele18g0206 1048 Gene3D Phosphorylase Kinase; domain 1 753 845 - -
Lele18g0206 1048 SMART LRR_typ_2 251 273 IPR003591 -
Lele18g0206 1048 SMART LRR_typ_2 519 543 IPR003591 -
Lele18g0206 1048 SMART LRR_typ_2 274 298 IPR003591 -
Lele18g0206 1048 SMART LRR_typ_2 101 125 IPR003591 -
Lele18g0206 1048 SMART LRR_typ_2 173 197 IPR003591 -
Lele18g0206 1048 SMART LRR_typ_2 390 414 IPR003591 -
Lele18g0206 1048 SUPERFAMILY L domain-like 227 556 - -
Lele18g0206 1048 PANTHER OS07G0626500 PROTEIN 9 104 - -
Lele18g0206 1048 Pfam Leucine Rich repeats (2 copies) 253 292 IPR025875 -
Lele18g0206 1048 MobiDBLite consensus disorder prediction 665 694 - -
Lele18g0206 1048 Pfam Leucine Rich repeat 125 137 IPR001611 GO:0005515
Lele18g0206 1048 Pfam Leucine Rich repeat 299 314 IPR001611 GO:0005515
Lele18g0206 1048 Gene3D Ribonuclease Inhibitor 220 586 IPR032675 -
Lele18g0206 1048 Gene3D Transferase(Phosphotransferase) domain 1 847 1048 - -
Lele18g0206 1048 SUPERFAMILY L domain-like 53 355 - -
Lele18g0206 1048 Pfam Leucine rich repeat 475 532 IPR001611 GO:0005515
Lele18g0206 1048 Pfam Leucine rich repeat 152 210 IPR001611 GO:0005515
Lele18g0206 1048 ProSiteProfiles Protein kinase domain profile. 768 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0206 1048 FunFam Leucine-rich repeat receptor protein kinase EMS1 468 563 - -
Lele18g0206 1048 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Lele18g0206 1048 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 243 467 - -
Lele18g0206 1048 Pfam Protein kinase domain 772 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0206 1048 SUPERFAMILY Protein kinase-like (PK-like) 771 1043 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0206 Lele-ChrLele18 1231494 1235702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0206 393 562 Receptor kinase-like Gene Family AT5G46330 29.412 2.64e-11 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele18g0206 Pkinase 6.3e-29 CL0016