Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0200 ATGAATTCGACATCCACACAGTTTGTTTCCACAAGAAGGATGGGTGTATATGATCCTATCCACCAGATTAGCTTGTGGGAAGAAAACTTCAAAAGTAATTGTAATTTAAGTGCATCTGTGCCCTTAATTGATGAGCCAGATGTGAAGTTGGATAATCAGTCAGAGGTTTCTTCTCAAGGAATGCTTGGAATTCCAAAGAATTATGACCAAGAAGCTAACAAGTCTATTGAAAAGATACAGAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCTTATGTTCAGCAATTAGAGTCAAGTCGTATGAAACTGATCAAGTTAGAGCAAGAGCTGGACCGTGCAAGACAGCAGGGATCTTTTATAGGTTGTGGATTGGATACTGATAATTTAGCATTCGCTGGATCTGTAAATTCAGGCATTGCAACCTTTGAGATGGAATATGGGCACTGGGTAGAAAAACAAAATAAACAAATTTGTGAGCTGAGAACCGCTTTAAATGCTCATATCAGCGACATAGAGCTCAGAATACTTGTAGATGGTATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCCGCAAAAGTCGATGTTTTCTATGTTTTGTTTGGAATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCTGAGCTTCTCAAGGTTCTTGTCCCTTTGATCGAACCTTTGACAGAACAACAACGAATGGATGTTTATAACCTTGGACAATCATGCCAGCAAGCAGAAGATGCCCTTTCACAAGGCAGGGACAGACTTCAGCAAATACTTGTTGAAACTGTCGCCGCCGGACAACTGGTCGACGGAACCTACATTCCTCAGATGGCTACTGCGGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCCGATCATCTTCGGCAGGAAACTCTGCAACAAATGTTTCGAATCCTTACAATTCGTCAAGCAGCTCGGTGCTTGCTTGCTTTAGGGGAATACTTCCAACGCTTGCGGGCTTTGAGCTCTCTTTGGGCAAATCGTCCTTCTGAACCACCTGCTTAG 1092 0.4332 MNSTSTQFVSTRRMGVYDPIHQISLWEENFKSNCNLSASVPLIDEPDVKLDNQSEVSSQGMLGIPKNYDQEANKSIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRMKLIKLEQELDRARQQGSFIGCGLDTDNLAFAGSVNSGIATFEMEYGHWVEKQNKQICELRTALNAHISDIELRILVDGIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILVETVAAGQLVDGTYIPQMATAVEKLEALVSFVNQADHLRQETLQQMFRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0200 363 Pfam bZIP transcription factor 78 113 IPR004827 GO:0003700|GO:0006355
Lele18g0200 363 Coils Coil 97 124 - -
Lele18g0200 363 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Lele18g0200 363 Gene3D - 76 126 - -
Lele18g0200 363 FunFam BZIP family transcription factor 77 126 - -
Lele18g0200 363 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Lele18g0200 363 PANTHER TRANSCRIPTION FACTOR TGA9 1 360 - -
Lele18g0200 363 SUPERFAMILY Leucine zipper domain 78 116 IPR046347 GO:0003700|GO:0006355
Lele18g0200 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Lele18g0200 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
Lele18g0200 363 SMART brlzneu 74 145 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0200 Lele-ChrLele18 1202053 1204183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0200 1 361 Calmodulin-binding Proteins AT5G10030 68.871 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele18g0200 DOG1 6.8e-31 No_clan