Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0169 ATGGGAAGATCACCGTGCTGTGATGAGATTGGTTTGAAGAAAGGCCCTTGGACTCCTGAAGAAGATCAGAAGCTTGTTAACTTTATTCAAGAGCATGGTCATAGGAGCTGGAGAGCTCTTCCAAAACTAGCAGGGCTGAACAGATGTGGGAAAAGTTGCAGGCTACGATGGACGAATTACTTGAGGCCTGACATAAAGAGAGGGAAATTTTCACAAGAAGAACAAGAAACAATTCTGGATCTCCATGCTATCCTGGGAAACAAATGGTCGGCGATTGCGAGCCAGATACCGGGACGGACAGATAATGAGATCAAGAATTTCTGGAACACTCATCTAAAGAAGAAGCTGATCCAAATGGGTTATGATCCGATGACACACCAACCTCGAACTGATATTTTCTCAAGTTTGCCGCATCTCGTAGCACTGGCTAATCTCACAGGACTTTTGGACCATCAACCATCGCAACAGAGTGTTGCTTTCAGACTGCAAACAGATGCTGTTCAATTGGCCAGACTTCAAGGCTTACAAAATCTCTTGCACCCTCAGCCTCAACCTACTGCAACTGAAAACCCCGACTTCACAAACTTGGATACCATTAATATTGATCTTCTGAAGTTCCTGAATCCGACGAACAACAACGCTGCTTTAAGTTCAACCCACTTGGAAAACAATAATGATATAAATAATCCACCTCCAATTGGAGTCAACAATTTCCAATTAGGCTATGACTCGTTCTCTAGCATGCCAGGGTTGAAATCGCCACGTAACTATCATCAACCCCCATCGACATTAAGTCAGGGAGAAAGTTCTCCCAATTCACCATGGCTTCTTTCATGCTCAAGCAGCACTATTCCATCTCCTTCCACTGTGCCAGAGATTTCAATGACTAATACTGTTAATTATGGAGAAGTGGTGGGTCCTTCCACGTGGCCCGACCTTCTGCTGGAGGACTACCCTTTGTTCCATGAGATTTCCTAG 978 0.4448 MGRSPCCDEIGLKKGPWTPEEDQKLVNFIQEHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEQETILDLHAILGNKWSAIASQIPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDIFSSLPHLVALANLTGLLDHQPSQQSVAFRLQTDAVQLARLQGLQNLLHPQPQPTATENPDFTNLDTINIDLLKFLNPTNNNAALSSTHLENNNDINNPPPIGVNNFQLGYDSFSSMPGLKSPRNYHQPPSTLSQGESSPNSPWLLSCSSSTIPSPSTVPEISMTNTVNYGEVVGPSTWPDLLLEDYPLFHEIS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0169 325 Gene3D - 13 66 - -
Lele18g0169 325 MobiDBLite consensus disorder prediction 249 290 - -
Lele18g0169 325 Gene3D - 68 131 - -
Lele18g0169 325 FunFam MYB-related transcription factor 13 66 - -
Lele18g0169 325 SMART sant 66 114 IPR001005 -
Lele18g0169 325 SMART sant 13 63 IPR001005 -
Lele18g0169 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele18g0169 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele18g0169 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele18g0169 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 210 - -
Lele18g0169 325 FunFam MYB transcription factor 68 129 - -
Lele18g0169 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele18g0169 325 CDD SANT 16 61 IPR001005 -
Lele18g0169 325 CDD SANT 69 112 IPR001005 -
Lele18g0169 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele18g0169 325 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele18g0169 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0169 Lele-ChrLele18 1035118 1036285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0169 1 324 MYB Transcription Factor Family AT5G10280 47.765 5.90e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele18g0169 Myb_DNA-binding 1.7e-16 CL0123