Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0160 ATGGAACGGTATGATATAATCAGAGATATTGGGTTCGGCAACTTTGGGGTGGCAAAGCTGGTTAGGGATGAACGGAGTGGTGACTTATTTGCTATCAAGTTCATTGAGCGAGGCTTAAAGATTGATGAGCATGTGCAAAGGGAGATCATAAACCATAGGTCCTTGAAGCATCCCAATATCATTCGATTCAAAGAGGTGTTGCTCACTCCCACACATCTTGCCATAGTGATGGAATATGCCTCTGGAGGAGAACTCTTTGAAAGAATATGCAATGCGGGTAGATTCAGTGAAGATGAGGCAAGGTATTTCTTTCAGCAGTTGATTTCTGGCGTCAGCTATTGCCATTCAATGGAAATATGCCACAGAGATCTTAAGCTGGAAAACACACTCTTAGATGGAAGCACAGCACCACGACTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCTGTTCTGCACTCTCAGCCCAAATCTACTGTAGGAACCCCTGCTTATATTGCTCCAGAGGTTTTGTCACGAAGGGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCTTATCCTTTTGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCGAATTCTCAGCGTCCACTATTCTATACCAGACTATGTTCGTATCTCAAAAGAGTGTAAACACCTTCTGTCTAGAATATTTGTGGCCGACCCAGAGAAGAGAATTACGATCCCAGAAATCAAAATGCACCCGTGGTTCCTGAAGAACTTACCACTAGAATTCATGGACGAAGGGAGACAAAGTGGGATACAAGAAGATTTAGTGAACGATAGGCAGAGCATCGAAGAAATAACGAGTATAATTCAAGACGCTCGAAAAGCAGGGGATCAAGGCCCAAAAGTGGGCGGGCAGTTCGTTGGGATTGGAAGTATGGATCTTGATGAGCTGGATACTGATGCTGACATTGATGATTTAGAGGCAATTGGCGATTTTGTCTGTGCTTTGTGA 1029 0.4334 MERYDIIRDIGFGNFGVAKLVRDERSGDLFAIKFIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYASGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSTAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSIPDYVRISKECKHLLSRIFVADPEKRITIPEIKMHPWFLKNLPLEFMDEGRQSGIQEDLVNDRQSIEEITSIIQDARKAGDQGPKVGGQFVGIGSMDLDELDTDADIDDLEAIGDFVCAL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0160 342 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele18g0160 342 PANTHER SERINE/THREONINE KINASE 2 279 - -
Lele18g0160 342 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele18g0160 342 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Lele18g0160 342 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Lele18g0160 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele18g0160 342 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Lele18g0160 342 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0160 342 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0160 342 CDD STKc_SnRK2 3 259 - -
Lele18g0160 342 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0160 Lele-ChrLele18 989393 992003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0160 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 42.599 3.70e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele18g0160 Pkinase 3.6e-71 CL0016