Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0154 ATGAAGAGACTTGGCAGCTCAGATTCTCTGGGTGCTCTTCTGCCCATCTGTCCATCCACAGAAGAACAAAGTCCGAGGAACAACAACCACGCATACAGTAGTAGGGAGTTCCAACCTATGTTGGACGGGCTAGACGAAGAAGGATGTGTGGAAGAATTAGGCCACCCGACGGAGAAGAAACGCCGTCTTGCTGTGGATCAAGTGAAGGCTTTAGAGAAGAACTTTGAAGTAGAAAACAAGCTTGAACCCGAGAGGAAGGTGAAGCTTGCCCAAGAACTGGGTTTGCAGCCCAGGCAAGTGGCCGTGTGGTTCCAAAATCGTCGAGCCAGATGGAAAACCAAGCAATTAGAGAGGGACTATGTCGTCCTCAAAGCCAATTATGATACTCTCAAACTTAACTACGATTCCCTCCAACAGGACAATGAAGCCTTGCTCAAAGAGATTCAGGAACTGAAATCTAGATTGCAAGATCAAGAGAAGAGTGAAGATATGTCGTTGAATGGAGAGATAAAGCAGCCTAAGTCGGAGGAGAAAGTGATGGGAGTGGGGGTGGAACCTCCTGAAACGATCATTCCGGGAATGGAGTCCGAAAACTTAAATTACGAGTGCTTAAACGGGAACGGCGTCGTAGGAGGTTGCTCACTCTTCCCGGCAGACTTTAACAAAGACGGCTCTTCCGACAGCGACTCGAGCGCTATCTTGAACGAAGATCCAAGCTCTTGTTCCTTCAAATTCAACTGTTCTTCATCGTCGTTTCAGTTCCAGAAAACGTGCCAGACTCAGATTCAATATGTGAAGATGGAAGAGCACAACTTCTTCAGCACGGACGAGGCCTGCAACTTCTTCTCCGTCGAACAGGCCCCAACCCTCCAGTGGTACGGGAGTTAA 888 0.4831 MKRLGSSDSLGALLPICPSTEEQSPRNNNHAYSSREFQPMLDGLDEEGCVEELGHPTEKKRRLAVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYVVLKANYDTLKLNYDSLQQDNEALLKEIQELKSRLQDQEKSEDMSLNGEIKQPKSEEKVMGVGVEPPETIIPGMESENLNYECLNGNGVVGGCSLFPADFNKDGSSDSDSSAILNEDPSSCSFKFNCSSSSFQFQKTCQTQIQYVKMEEHNFFSTDEACNFFSVEQAPTLQWYGS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0154 295 MobiDBLite consensus disorder prediction 155 180 - -
Lele18g0154 295 FunFam Homeobox-leucine zipper protein HAT5 52 116 - -
Lele18g0154 295 CDD homeodomain 59 115 IPR001356 GO:0003677
Lele18g0154 295 Coils Coil 113 161 - -
Lele18g0154 295 MobiDBLite consensus disorder prediction 1 32 - -
Lele18g0154 295 SUPERFAMILY Homeodomain-like 40 116 IPR009057 -
Lele18g0154 295 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 50 272 IPR045224 GO:0003700
Lele18g0154 295 PRINTS Lambda-repressor HTH signature 94 110 IPR000047 GO:0003677
Lele18g0154 295 PRINTS Lambda-repressor HTH signature 85 94 IPR000047 GO:0003677
Lele18g0154 295 Pfam Homeodomain 59 112 IPR001356 GO:0003677
Lele18g0154 295 Gene3D - 53 120 - -
Lele18g0154 295 MobiDBLite consensus disorder prediction 155 178 - -
Lele18g0154 295 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Lele18g0154 295 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Lele18g0154 295 Pfam Homeobox associated leucine zipper 114 156 IPR003106 GO:0006355|GO:0043565
Lele18g0154 295 SMART HOX_1 57 118 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0154 Lele-ChrLele18 951547 952777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0154 1 295 Homeobox Transcription Factor Family AT4G40060 48.867 2.71e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele18g0154 Homeodomain 8.1e-16 CL0123