Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0127 ATGGATTTGGGCTCGACTAAGCTCGACTATTACGATGACATGTGCAGGCTCCAATCTTCTGCCACACTTCTTTCCTACTTCAAGGGAGATGACGGCAGGAATGCTCTAATTTTAGATCGCACTATCTTCTATCCGCAAGGTGGTGGTCAGCCGGCCGATACTGGCTTCATACTCATTTCTGGTTCAGCCTGCAAGTTTGTGGTTCAAGACGTTCGATCAAAAGATGGAATTGCCTTCCACTATGGATTATTTGAGAATTTGGGCGAGGAATTTGAAAACAAAGTTGAGACGGGAAGGGAGGTCACACTTCATGTAGATGATGCCCGGCGAAAGCTGAATTCCAGGTTGCATTCAGCTGGCCATTTACTTGATATTTGTCTGCCCAGAATAGGATTGGGTCATTTAGAGCCTGGCAAAGCTTACCATTTTCCTGATGGGCCTTGGGTAGAATATAAAGGAACAATTCCACAAAATGAAATGCAGAACAAGCAAAAAGATTTAGAGCTAGAAGCTAATGTGCTAATTTCAGTGGGAGGAAAAGTTTCTGTTGATATATTACCATATGAAGAAGCTGCTAAGCTCTGTGGTGGTTGCCTTCCTGATTATGTTCCCAAGGAAAGCACACCTCGCATTGTGAGGATAGGAGATACTCCTGGCTGTCCCTGTGGTGGTACCCATGTTTCTGATATTTCAGATATTGTACGCATTAAGGTCTTGGCACCTGGTGCATTCAACTTCCCAACAAATGAGGTTGCAAATTTCTATAACAAAGTGGTCCATGGTAATTTCACAAGTCAACGTCACTTTCCACAAACCACAATATTGGAGAGTAGTAAACAGAAATGTGCAAGTGTCCGTGTTGGAATGAAACTCAAGAAAAAACCGGACTTTACCGATAAACAGGGAATCGACAAAAGAGACCAAAATTATGTATGTTGCTGCATTCTGATTTCGTCGTCTCTCTCGGTTCCGTGTGCCTTGTTGAGGATCTACTGGTACGGTCTCATGATATGGATCACTCTCTCTGAAGCTTTGGTTCTGACTTCTGAGAGGGAGGAATTGTGGCAAAGAAGTCCATTGAGGATATCAAGCATGCTTAGTACTGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGCAATAGACAAAGAAGTATACCTTGTGAGGTTTCCAAAGGCTATAAAATTCTACCTGAAGTTCACCGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTGAGCGCAAATGCTACGTTAGCCAACACAAACATCTGCAATGGTTTGATAGGAGAAGAATTACTTCCAACTTGGGACTCACCTAATTCATTTCGTAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTATCATCTTCTCTCCACAGTAATTGGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGTGACACGCTTGATTATGACTCTTGTACATTAAAATCCATGAGTGCTCCTTCCAGGAGTGAAGGTTTTCTTAATGCCATGGAAGTCCAAGCAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTATGTGCGGTTTATGATGGCTTTAATGGTAGAGATGCCGCCGACTTTCTGGCCGGTACTCTGTATGACACCATTATATCTAACTTTAATACGTTGTATTGGGAATTCGAGCTAGATTCCATCAAAGCTTCTTATGACGTGGGTTTGGGTGGTTCCTATAAGTTGGATGATAATCTCATTGTTCATGAGGAGCAATCTCTGTCAAAACTCAAGGGAAACAACAATTCTTATCTTGGCTGTTTGCCAAAGAGGTTAGGAGCGCCTTATAAATCATTTTCAGATGGTTTACTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGGCCTGATTTAGTTTCTGTTGGATCTTGTGTTTTACTCGTGCTTCTTCATGGGAATGACTTATACACACTTAATTTAGGTGACAGCAAAGCTGTATTAGCAACATGTAATACAAGAGGCAAGCTTCAAGCTATCCAGCTCACAGAAAGTCATACGGTTGAAAATGACGTTGAAAGAGCTCGACTTCTGGCTGATCACCCCGATGATCCTAAACCCATCATAGGAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCACTGATGGGAATCCTTGGAGTCCAAGATCTTATAAGCCCTCCATATGTTTCCTCTCAACCATCACTGAATGTGCACAAGATCTCAAACTCTGATCAATTTGTGATAGTAGGAAGTGACGGCTTATTTGACTTCTTCAGTAATGATGAGGCTCTGGAGTTTGTTGAGTCTTATATCTTAAGCAATCCATTTGGCGATCCAGCTAAGTTTCTTATCGAGCAGCTTGTAGCAAGAGCAGCCAATTCCGCAGGAAAGAACTTGTTCATAGCAGTACTAGTATTTGTTCTGTTGTGTGATGTCAGTTGCGGCAGCAAGATACCTCAAGGTTTTGGCTTTTTGAGGTGTAAATGCGATGCCAAAATGGTTGGTCTTAAAATGAGACTTGGCAAAACAAAAAGTGCTATTCACTGTGTGATATGA 2670 0.4206 MDLGSTKLDYYDDMCRLQSSATLLSYFKGDDGRNALILDRTIFYPQGGGQPADTGFILISGSACKFVVQDVRSKDGIAFHYGLFENLGEEFENKVETGREVTLHVDDARRKLNSRLHSAGHLLDICLPRIGLGHLEPGKAYHFPDGPWVEYKGTIPQNEMQNKQKDLELEANVLISVGGKVSVDILPYEEAAKLCGGCLPDYVPKESTPRIVRIGDTPGCPCGGTHVSDISDIVRIKVLAPGAFNFPTNEVANFYNKVVHGNFTSQRHFPQTTILESSKQKCASVRVGMKLKKKPDFTDKQGIDKRDQNYVCCCILISSSLSVPCALLRIYWYGLMIWITLSEALVLTSEREELWQRSPLRISSMLSTEGELKISFGYQCNRQRSIPCEVSKGYKILPEVHRTSSFSCLSGAALSANATLANTNICNGLIGEELLPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNWSNLSCSPSTPSDTLDYDSCTLKSMSAPSRSEGFLNAMEVQAAGGAAGEDRVQAVCSEENGWLLCAVYDGFNGRDAADFLAGTLYDTIISNFNTLYWEFELDSIKASYDVGLGGSYKLDDNLIVHEEQSLSKLKGNNNSYLGCLPKRLGAPYKSFSDGLLDSLERSLSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSKAVLATCNTRGKLQAIQLTESHTVENDVERARLLADHPDDPKPIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILGVQDLISPPYVSSQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEALEFVESYILSNPFGDPAKFLIEQLVARAANSAGKNLFIAVLVFVLLCDVSCGSKIPQGFGFLRCKCDAKMVGLKMRLGKTKSAIHCVI 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0127 889 SUPERFAMILY ThrRS/AlaRS common domain 106 240 IPR018163 GO:0000166
Lele18g0127 889 Gene3D - 106 244 - -
Lele18g0127 889 Gene3D - 1 104 - -
Lele18g0127 889 ProSiteProfiles PPM-type phosphatase domain profile. 500 844 IPR001932 -
Lele18g0127 889 Pfam Protein phosphatase 2C 639 829 IPR001932 -
Lele18g0127 889 FunFam Similar to alanyl-tRNA synthetase 106 240 - -
Lele18g0127 889 PANTHER ALANYL-TRNA EDITING PROTEIN 5 239 - -
Lele18g0127 889 CDD PP2Cc 513 844 IPR001932 -
Lele18g0127 889 FunFam Threonyl and alanyl tRNA synthetase second additional domain-containing protein 1 103 - -
Lele18g0127 889 SUPERFAMILY Translation proteins 4 85 IPR009000 -
Lele18g0127 889 SMART PP2C_4 491 842 IPR001932 -
Lele18g0127 889 Pfam tRNA synthetases class II (A) 34 108 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Lele18g0127 889 SUPERFAMILY PP2C-like 513 830 IPR036457 -
Lele18g0127 889 Gene3D - 481 844 IPR036457 -
Lele18g0127 889 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 1 239 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0127 Lele-ChrLele18 786572 794846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0127 370 837 PP2C-type Phosphatase Gene Family AT3G16560 61.814 3.10e-179 525