Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0126 ATGCCACGGAAGGAAGGGTATAATTACGAATGGTGCCACTGGACTTTGAACGCCACTCGGCCAGCGCAACTAGAAAATAGCATCAATTCTATCCTTGGACTTTGTTTCCCGGCTTATTCAATACTTCAAATAGTATTGCAAACCTCGCTTTCTCTTGGAAAGTCTGAAAGAGCCAAAGCAATTACGCGGTTCCAGTTGTATAAAGGAGTAATGGGTTGCTTTCAAGAGTTGGCTTACTGGGCTGTTCCACCGAAGTCCGAACCCGCCCAAAATAAGAAACTAGGTTTTCGTCATTTAAGATTCGCTCATCTTCAAAGCCGACCGTCTCTCCCCGGCACGCAGGTTTGTTCGCCCCCTCTGTATTCTATCTTGAGTCAGGTTCCTAGATCTTTAACGAAGAATTCTTTATACGCTCCAAAACAAAGGATGCAGAACGAGGAGGGACAGATTACTGAGCTTTACATTCCAAGGAAATGCTCCGCAACAAATAGACTGATAACTGCAAAGGACCATGCCTCCGTCCAGATTAACATTGGGCATCTGGACGAGAACGGTATCTTCAATGGTCATTCCTCCACATTTGCTATGTGTGGTTTCATTCGTTCCCAGGGGGATGCTGACAGTGCCTTAGATCGTCTGTGGCAGAAGAAGAAAGTCGAAGCCAAGCAACAGTAG 675 0.4593 MPRKEGYNYEWCHWTLNATRPAQLENSINSILGLCFPAYSILQIVLQTSLSLGKSERAKAITRFQLYKGVMGCFQELAYWAVPPKSEPAQNKKLGFRHLRFAHLQSRPSLPGTQVCSPPLYSILSQVPRSLTKNSLYAPKQRMQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGIFNGHSSTFAMCGFIRSQGDADSALDRLWQKKKVEAKQQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0126 224 Pfam Ribosomal protein S21e 143 219 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele18g0126 224 PANTHER 40S RIBOSOMAL PROTEIN S21 143 222 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele18g0126 224 Gene3D - 139 224 IPR038579 -
Lele18g0126 224 ProSitePatterns Ribosomal protein S21e signature. 153 161 IPR018279 GO:0003735|GO:0005840|GO:0006412
Lele18g0126 224 FunFam 40S ribosomal protein S21 143 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0126 Lele-ChrLele18 780003 784722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0126 143 223 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 2.48e-48 152