Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0121 ATGGACCAATACCCTAAACCTCGATCCTATGCACCACAGATGGAGATGACGATTCCCCCCTCCCAGCTTTCCGACAACGATCGGAGCAGCTCCGAACTGCGAGCTCTCGATTGCAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACGTCGTGCTCCATGCAATGGGTTCCACTTATCACCTCCATCGCCTTATCCTTTCCCGGAGTTCTTACTTCAGAAATATGCTTCGTGGTCCCTGGAAAGAAGCCCGTGCTCCTGTTGTGACCCTGCATGTTGACGATAAGAATGTTAATGATGAGGCAATCACAATGGCTTTGGCATATCTCTATGGGCACCACCCTAAGCTTAGTGATAGTAATGCATTTCGCGTTCTTGCTGCCGCATCCTTTCTTGACCTCCAGGACTTGTGTGCAATATGTACAGACTTCATTATATCCGAGCTGTTGACTTCAAATTTCTTGGCTTATCAGGTATTTGCAGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAAATGCTTGTTGGGGATACCTCTGTCAAAGTGGCAGCATGGAGTTGAAAGAGGTGCTTCCGAAACTTTCTTCTCAAACATTACATGCATTACTGACCTCTGATGAACTGTGGGTACCAAGTGAAGAGAAACGGTTTGAATTGGCATTACACACATTCCTGGCAAAAAATGCTCACTGCAAAGCTGAGCATCCTGAGCAAGGAAGTTCTGGTTCTGAGTCTGCGACTAATACCCATTCTGATTCTGATAATATTAAGGGAAAAAGTGGAGCTGATAGCTGCACAAGTAATAGGTTCGGAACTGTAGGGCGTCTGAATATTAAAAGTGATGTAAAGGAAACAGTTGATCATAATCTGCGAGTTGAGGTTGCAGACGATGTGACTCACTTCAACAATGAGGATTCTGATTCTCATCAATTGGCACAAGCAACATTATTTGCTGATTCATCAAATTTGGAACCTAGATATGCTTGCAACATGGAAGGGCCTTCGTCAATCAGTAATTTTTTCAGAGAAAAAGATGGAACCAGAACATCATGTTCTTATGTTGAGATGCCTCTCACTGCTGGAGCAAGTGGAGTGGCTATTGAAGGGTCATCTGAGGAAGGGTCAAATTCTTCCTGCAATGGCCCCACATCCAGTGATTGGGGAAGATACAGTGTGCCTCTTTTTCCATGGGGCAGCCGGGTAGTTGGTGTAGGCCGGCTTAAAGCTCAATCCAAAGGGAAGTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGGCGCTTCTGAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTAAGTCAGAGGGTGCAAGAAATTGCTGATGATACATGCAAAGCTTGTTGCCTTGTGAGTGCAGCATGCACTTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTACCACTCCTAGTTGCTACATGCAAGAACATAACCAGAATAATAGTTCTGGGAACATGGGAAACATATATGTTGCTGAGTCTTCTCAAAGTCAAGGAAGTGGCATATTTAGCCATGTACGAATACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGTCGAGGAACTACATTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGCATGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCGGCTAATGATGATTCAGAGACACAAGCTGACCACAACGTAGACATGTCTGGAGATGGGTTGACGGCTTTGGTTGGGCTAAGCCAGGAAGGGAGTCGTGGAACCAATGCACATGGAGAGATGACACAAAGGGATTATGAGACTGGCATGCGAAGCAGGATCTCTGGAACTGCTGCTGGAGGCCAAAGTACTGATGGCATTCCCATGCAAATGTTAGGGGCACAAGAACATGCCATAGGAGTAGAATGGGACAATACTAGCAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCTCCATTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAAGTGTTCTATGCTGGTTCTCTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGAGAACTCTCGGATTGTTTATTCACCGTCGGAAAGCAGAGATTGCTGATTTACATAGAAAGGTGCACATGTATGTGGATTCTCGTGAAAAGGTGACTGCTCGCTATCAGGATCCCAAAGCCAGAAATTTCACATCTTTCACCATGCCTTCTCCTTCCTGGCTCACAAGCCTCACTTGTTCACCTTCCTCCATAGAATCCTCTTCTCCTTCACTACTTCTAACTCATTGGTCTGCCTTCATTTTCCTATCTCCATGTCCTCAGCGAGTGTTGCTTTCTTTGGTTGATCTCTTCTTCTTGCTGATTCTTTTAGCCTTCTCCCTTCGGAAATTCTGTTACCCACCCATCTCTTATGCTAACACCAGCTCATCCATAGCTAGACCCCTTCTGTTTGAAAAGGACTCACACCACAAAGTTACTTCATCTTTCCATTTTCCTTTCGCTGTAGACATTCTGTTGGCAATAGCTTACGTGGTTTTAAGCATCTTAACCTTCACTCACGCCTCTCAGACTTCATGGAAACTGATCGAAGCTCTGTTTCGGGGTGATCAGGCAATAACCAACTTAGTGGTTGTGCTTGTGCTTGTGATGGTGAACGAGGAGAAGCTAAACATCCTCTCCAACTTGGAGTTTAATTTGAAAATTGACGATATATTCTCGATTATAAATATTCCCGTGGCTGTTTATCTATCATTAGTAGCTGTTAAAGGGTCATCGGGGATTCATGTAGTCAAAAGACCAGATTTTGATTCGAGCTCCGCAGAACCATTGTGCCACAGGCTTTTAACAGAAGAGAATTTAAGTCCTTACGCTTATGCTTCCCTGTTCTCCAAAATGGTGTGGCTGTCGATGAACCCTCTGCTCCAAAAAGGCTACAACTCACCACTTAAACTTGATGATTTGCCTTCACTTCCTCCTGAGTTTCGAGCTGAGAAAATGTCAGAGCTTTTTGCGATGAATTGGCCGAAGCCAGAGGAAAGTTGCAAATATCCAGTAGGAATCACACTACTCCGATGCTTCTGGAAACACGTAGCTTTCACTGGCAACCATTTGGCTTGCGGTTTCGCCCATGGGGCTGGACAGATTGTGAATTACTTGGCTGTGGACGCTCAGCAGCTAGAGGATATGATGCTGCAGCTGCATTCTATTTGGTTGACGCCTTTACAATTTGCAGCTGCTTTGGTTTTGATCCACTGCTATCTTGGCTTATCCACATTTGCGGCCATGCTTGGGACCATTGCAATGTTTGCGTATGTACTACTGGGCACAAAAAGGAACAATACTTTCCAGTTCAGTATAATGGTGAATCGTGATTTGAGGATGAAGGCCATGACTGATATGCTTCTCATGGGAATTCTCCGGGTTTCTCCTACTGTGATAGCAGTTCTTACCTTTGGAGCAGCAATTCTTCTGGGGTTTGATCTTGATGCTAGCACTGTGTTTACCGTAATGGAACTGGATGAAAGTTCGGTGGAGAGAGTGGAAGACAGTGAGAATAACGTAGCAGTGGAAATAAAAGAAGGGTGTTTCTCATGTGATGATGAAGGAGAGAAGGTGACTCTGGAAGTTTCAGAGCTGGAAATAAACAAGGGGGATCTTGCTGCAGTTGAATGTGTTATTGGAGCTCTCAAGGACAAGACCATTATCCTTGTAACCCACCAAATTGACAATGTCAACCTTATAGCGGCAAGTCATCTTACTGATGACGAGAAAACTCATGACGCAAGAAGTTGTTCATGGATGCATTACTTGACTGATACATCTGGCTATGCTTATGGTCCATATGCGAAACCTTCAAAAGAAGGGGAAAGCAGTGGCAAAATAAACTCTCAAGAGGAAGACAAGTCTGATTCTAATAAGGGAACATCAAAGCTCATTGAAGATGAGGAGAGAGAAACCGGCCGAGTCAACTTCCAAGTATATAAACAATATTGCACCGAAGCATATGGATGGTGGGGATTAGCAGTAGTCCTGCTAATGTCTCTCATGAGTATTGTAGCTACGATGGCTGGAGACAACTGGCTGGCATTTGAAACTTCAAAAGATCGCGCCTTTAATCCCACTCTATTCATCGGCATGTACGCTGGTATTGGAGTTATTTCATGTGTACTGAAATATTACCTAGCATCTTCTCGGGAATTGAGTCGGCTTGATTCTATTGCAAAAGCTCCTGTGATTCATCAATTTTCGGAGACCATTTCTGGTGTCACGACAATCCAATATGTTGGTTTGTCTCTATCCTATGGCCTGAGTCTGAGTGCTGTTATGGCAATTTCCGTAACTTTGACTTGCCAAGTTGAGAACAAAATGGTCTTAGTCGAGAATAAAGCAGTTCTCCAATATTCCACCAGAATCTCCATGGAGAATCCCTAA 4629 0.4429 MDQYPKPRSYAPQMEMTIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDVVLHAMGSTYHLHRLILSRSSYFRNMLRGPWKEARAPVVTLHVDDKNVNDEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCAICTDFIISELLTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGSMELKEVLPKLSSQTLHALLTSDELWVPSEEKRFELALHTFLAKNAHCKAEHPEQGSSGSESATNTHSDSDNIKGKSGADSCTSNRFGTVGRLNIKSDVKETVDHNLRVEVADDVTHFNNEDSDSHQLAQATLFADSSNLEPRYACNMEGPSSISNFFREKDGTRTSCSYVEMPLTAGASGVAIEGSSEEGSNSSCNGPTSSDWGRYSVPLFPWGSRVVGVGRLKAQSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIADDTCKACCLVSAACTCRQPFAFSQGVTTPSCYMQEHNQNNSSGNMGNIYVAESSQSQGSGIFSHVRIHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRMPFGVGNRNYPQSAANDDSETQADHNVDMSGDGLTALVGLSQEGSRGTNAHGEMTQRDYETGMRSRISGTAAGGQSTDGIPMQMLGAQEHAIGVEWDNTSSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFIHRRKAEIADLHRKVHMYVDSREKVTARYQDPKARNFTSFTMPSPSWLTSLTCSPSSIESSSPSLLLTHWSAFIFLSPCPQRVLLSLVDLFFLLILLAFSLRKFCYPPISYANTSSSIARPLLFEKDSHHKVTSSFHFPFAVDILLAIAYVVLSILTFTHASQTSWKLIEALFRGDQAITNLVVVLVLVMVNEEKLNILSNLEFNLKIDDIFSIINIPVAVYLSLVAVKGSSGIHVVKRPDFDSSSAEPLCHRLLTEENLSPYAYASLFSKMVWLSMNPLLQKGYNSPLKLDDLPSLPPEFRAEKMSELFAMNWPKPEESCKYPVGITLLRCFWKHVAFTGNHLACGFAHGAGQIVNYLAVDAQQLEDMMLQLHSIWLTPLQFAAALVLIHCYLGLSTFAAMLGTIAMFAYVLLGTKRNNTFQFSIMVNRDLRMKAMTDMLLMGILRVSPTVIAVLTFGAAILLGFDLDASTVFTVMELDESSVERVEDSENNVAVEIKEGCFSCDDEGEKVTLEVSELEINKGDLAAVECVIGALKDKTIILVTHQIDNVNLIAASHLTDDEKTHDARSCSWMHYLTDTSGYAYGPYAKPSKEGESSGKINSQEEDKSDSNKGTSKLIEDEERETGRVNFQVYKQYCTEAYGWWGLAVVLLMSLMSIVATMAGDNWLAFETSKDRAFNPTLFIGMYAGIGVISCVLKYYLASSRELSRLDSIAKAPVIHQFSETISGVTTIQYVGLSLSYGLSLSAVMAISVTLTCQVENKMVLVENKAVLQYSTRISMENP 1542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0121 1542 SUPERFAMILY ABC transporter transmembrane region 1437 1496 IPR036640 GO:0005524|GO:0016020
Lele18g0121 1542 MobiDBLite consensus disorder prediction 1 30 - -
Lele18g0121 1542 Gene3D ABC transporter type 1, transmembrane domain 1107 1205 IPR036640 GO:0005524|GO:0016020
Lele18g0121 1542 MobiDBLite consensus disorder prediction 15 30 - -
Lele18g0121 1542 Pfam BTB/POZ domain 52 156 IPR000210 GO:0005515
Lele18g0121 1542 Gene3D Potassium Channel Kv1.1; Chain A 24 191 IPR011333 -
Lele18g0121 1542 ProSiteProfiles BTB domain profile. 58 128 IPR000210 GO:0005515
Lele18g0121 1542 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 12 789 - -
Lele18g0121 1542 MobiDBLite consensus disorder prediction 249 274 - -
Lele18g0121 1542 MobiDBLite consensus disorder prediction 1358 1380 - -
Lele18g0121 1542 SUPERFAMILY POZ domain 52 156 IPR011333 -
Lele18g0121 1542 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1108 1200 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele18g0121 1542 SMART BTB_4 58 158 IPR000210 GO:0005515
Lele18g0121 1542 MobiDBLite consensus disorder prediction 244 274 - -
Lele18g0121 1542 MobiDBLite consensus disorder prediction 1347 1380 - -
Lele18g0121 1542 Gene3D ABC transporter type 1, transmembrane domain 1404 1500 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0121 Lele-ChrLele18 753713 764989 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele18g0121 BTB 1e-14 CL0033