Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0105 ATGATGGGTAACGCCGACCCCCATTTCAGTGAAGAAGATGCCAAGAGCTACGCTCTTAGCGGCAGGATTATGCTTAGCGCCATTGTCATTTTATTCTTCATCGTTATTTTTATGATTTTCCTTCACCTGTGCGTTCGCTGGTTTCACATACAAGATCGTCGCCGCCATCGCCGCCGCTCTCACCTCGTATTCTACGCTGACTCCGCCACTCCTGCTATGGCCTCGTCGCGTGGTCTTGATTCGTCTCTACTCATTTCTCTCCCCGTCTTTGTCTACTCTTCTAACACTCACCCGGAACAGATTAAATGCCCAGTCTGCTTGTCTGAGTTCGAAGAGGGCGAGGCGGGTCGAGTTTTGCCCAAGTGCAATCACAATTTTCACGTTGACTGCATCGACATGTGGTTCAAGGCCCACTCCACATGCCCCATTTGCAGGGCTGCCGTTGAACCTTCACAGGCGGACACCAACTGTCCGGAAGTGGTGATAACTGTGAGTGAACCAGAAATTCCCGAACCAGGGTCGCTTTCTGGGCTGTGTTCGGAGTGTCAGCACGAAGGGAGGGATGAAACCGGAAGCAGCCACACGGTTTGTTCTTCATCATCTTCTTCGATTGGGTTAGGGCGGAAGCCACCGTCACTAGTGGGTGTGACCCTGGAGGTGCCCAAGAGGAGCGAGAGCTTTGGAGACGAGCCGGCCTGCGAGTCGCCGTCGACTCAGTCATTGTTCAGGTCATTGATGAGTCGCATGCTGTCGTTCAAGAGGACGCTCAGCAGAGACCGGAAAGCAGACCTTTCACCATCGGCAGAGACTAGTACGGCGGGGGGCAGCGGCGCTGGGAACGAGTTAGAGAAGGAAGGAGGAGGACGAGAGGAGACCCAATGA 882 0.5408 MMGNADPHFSEEDAKSYALSGRIMLSAIVILFFIVIFMIFLHLCVRWFHIQDRRRHRRRSHLVFYADSATPAMASSRGLDSSLLISLPVFVYSSNTHPEQIKCPVCLSEFEEGEAGRVLPKCNHNFHVDCIDMWFKAHSTCPICRAAVEPSQADTNCPEVVITVSEPEIPEPGSLSGLCSECQHEGRDETGSSHTVCSSSSSSIGLGRKPPSLVGVTLEVPKRSESFGDEPACESPSTQSLFRSLMSRMLSFKRTLSRDRKADLSPSAETSTAGGSGAGNELEKEGGGREETQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0105 293 FunFam RING-H2 finger protein ATL3 70 150 - -
Lele18g0105 293 SUPERFAMILY RING/U-box 86 155 - -
Lele18g0105 293 MobiDBLite consensus disorder prediction 257 293 - -
Lele18g0105 293 SMART ring_2 103 144 IPR001841 -
Lele18g0105 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 151 IPR013083 -
Lele18g0105 293 MobiDBLite consensus disorder prediction 192 207 - -
Lele18g0105 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 167 - -
Lele18g0105 293 Pfam Ring finger domain 102 145 IPR001841 -
Lele18g0105 293 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Lele18g0105 293 MobiDBLite consensus disorder prediction 182 212 - -
Lele18g0105 293 CDD RING-H2_EL5_like 102 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0105 Lele-ChrLele18 690016 690897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0105 14 268 Rapid Response to Elicitors AT3G16720 51.648 5.25e-68 212