Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0104 ATGAGAAACTCCACGATGTTCCAAGAGCTGGAGAAGGAGCCCAACACGAAAGACGCCTTGGCCGTGTGCGAGGAGGTGTTTGGTTACGCGTTGAAGAGAATCAATGACTCCATCGATAAGGGGGATAAGTTCGAACTGAGCAATCTGGGCGAATTCGCCTACGACCTCAAGGCTGGCCAGACCATGGCTCATGCATTGAAGACGGCGTTGGAGATGAGTAACAACGCGCTGGATATAGTGGAAGGATTCTCCAGCGGCATAGAGGATTTCAACTTGGACAAAACACTGGATGATGTTGAGAACACGGATGACGTCAGAAACAAGAGCAGGAAGCTGCTGTCGATTGCCTCCTCCTCGGCCGAAGCGTTGGCGGCGGATAATATACCAACGTGGGTGAGCGGCCACCAGAGAAGGCTGTTGCAGGTGGGAACTCAAGGGTTGCAGGCGGACGCTGTGGTTGCACAGGACGGGACAGGCCAGTTCAAGACATTGACGGACGCACTCAACACAGTTCCCCCAACCTACAACAAGCCCTTTGTCATATACGTCAAGGCTGGGGTGTACAAGGAGGAAGTAACCGTAGCCGCAAACACCATGAACTTTGTGATCATCGTCGGAGATGGCGCCACGAAGACCAGATTCACGGGAGCCAAATCCCAAAAAAATGGCGTCACAACTTATCACACCTCATCTTTCTCGTTGAATGCCAATAACTTCATGGCAATAGACGTAGGGTTCGAGAACACTGCGGGACCTAGCGCGGGGCCTGCGGCGGCGCTGAGGATAACCGGAGACAAGGCAGTAGTATACAGGTGCTACGTGGACGGACACCAAGACAACTGTATCCGAGTGCTTACAGGCAGTTCTACAGGGACTGCATGGTGTGGGGGACCATCGATTCATATTCGGGGATGCAGTGACGGTATTCCAGAACTGCACAATAATGGTGAAGAGGGGTGTAGATGGGCAGGAAGGCGTGGCCCAGGTGGTGATGTTTCGCAGAGAGTGAAATGGCCCGGTGTGAACGCGAATCTGCCTCAAAGCCAGGCCGCTCAATACCATCCCGCCAGATACTTCCAGCGATCAAATAATGAAGGAGATGCGTGGATTGTTTCATCCGGCGTCCCCTACTCCAGTGGCCCAATGCTCGCCTCCTCCCCCTAG 1164 0.5369 MRNSTMFQELEKEPNTKDALAVCEEVFGYALKRINDSIDKGDKFELSNLGEFAYDLKAGQTMAHALKTALEMSNNALDIVEGFSSGIEDFNLDKTLDDVENTDDVRNKSRKLLSIASSSAEALAADNIPTWVSGHQRRLLQVGTQGLQADAVVAQDGTGQFKTLTDALNTVPPTYNKPFVIYVKAGVYKEEVTVAANTMNFVIIVGDGATKTRFTGAKSQKNGVTTYHTSSFSLNANNFMAIDVGFENTAGPSAGPAAALRITGDKAVVYRCYVDGHQDNCIRVLTGSSTGTAWCGGPSIHIRGCSDGIPELHNNGEEGCRWAGRRGPGGDVSQRVKWPGVNANLPQSQAAQYHPARYFQRSNNEGDAWIVSSGVPYSSGPMLASSP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0104 387 Gene3D - 147 297 IPR012334 -
Lele18g0104 387 SUPERFAMILY Pectin lyase-like 147 378 IPR011050 -
Lele18g0104 387 Pfam Pectinesterase 150 280 IPR000070 GO:0030599|GO:0042545
Lele18g0104 387 PANTHER PECTINESTERASE 12 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0104 Lele-ChrLele18 684835 686445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0104 327 377 Carbohydrate Esterase AT5G49180 43.137 2.51e-06 47.8