Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0094 ATGTTTCCTTCTGCTGTTTCAAACCTTTCTGGCTTTAAAAACCCTAGCTTTGATCAATCTGCCTCTTTGTTGATCAGAATGTGGATGGTGGGACATAACGATGGTGGTGATATTAACGTTGTTGATCACTCATTCAGTGGAAGAAAGCTCAGGCCTCTCATTCCCAGGCCAGTGACTTCTTCCGATTATACTTTATCCACAACTCCCCCTTGCCTAAGAAGTAATCAAGGCTCGGATTTGTTTACACAGTATCACGATCTCACATCAACGACGGATCAGAGTAAGAAAGAGTTAAATACTCCACCAGTCGTGGTGAGCTCAAGGTGGAATCCTACTCCAGAACAGCTAAGAGCCCTTGAAGAATTGTATCGGCGAGGAACAAGAACGCCATCTGCCGAGGAAATTCAACATATAACTGCACAGCTGCGGATATTTGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGACAGAAACGGCGACGTCAGATGGAATCGGCTCCCCGTGATTTTGATAGTCTAGAGAAGGAAGACTTAGATCTGTATTATGTGATGCTTTTCCCTCCCTTTTACGTTCCGGTTGAATCTGTGTCAATACCAAGAGCAACAAAAGCAGTGGCCGCATCAGAGCGAAGAACGGAATTACAGCAAAGAAGAAACTTGATGGAAAGGAATGCCACGTGGCCGATGATGCAGCTATCATGTCCTCTTCCCCATCCTGCGGCTTGCCCCCACCTCATAAACACGTCTACAGCTAGTTTAATGGCTTCCACGAGCACGGTAACAGCGAGAGCGATTGACACAGAGTTCATTAAGGCGCATGATCTCAGCTTCTTTATATCGCCTCACAGTGAAAGCACGGTCATCCACTTTAACAGGGTCAGTGATGACCTAGTTGATCACTGCGGTGAACCTCAAACCCTTGAACTTTTCCCTCTAAGAGGTGGGGATGGCAGTGATAACGTCAACCATAAAGAGTGTGAGATTTCAGTCTCTGAATCAATGAATGCCAACTTGACCCCAAGCCAGTTCTTCGAGTTCCTTCCCTTGAAGAACTAA 1083 0.4534 MFPSAVSNLSGFKNPSFDQSASLLIRMWMVGHNDGGDINVVDHSFSGRKLRPLIPRPVTSSDYTLSTTPPCLRSNQGSDLFTQYHDLTSTTDQSKKELNTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITAQLRIFGKIEGKNVFYWFQNHKARERQKRRRQMESAPRDFDSLEKEDLDLYYVMLFPPFYVPVESVSIPRATKAVAASERRTELQQRRNLMERNATWPMMQLSCPLPHPAACPHLINTSTASLMASTSTVTARAIDTEFIKAHDLSFFISPHSESTVIHFNRVSDDLVDHCGEPQTLELFPLRGGDGSDNVNHKECEISVSESMNANLTPSQFFEFLPLKN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0094 360 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 92 355 IPR044555 GO:0003700|GO:0099402
Lele18g0094 360 CDD homeodomain 108 168 IPR001356 GO:0003677
Lele18g0094 360 Pfam Homeodomain 107 166 IPR001356 GO:0003677
Lele18g0094 360 SUPERFAMILY Homeodomain-like 107 174 IPR009057 -
Lele18g0094 360 Coils Coil 213 233 - -
Lele18g0094 360 FunFam WUSCHEL-related homeobox 4 106 173 - -
Lele18g0094 360 Gene3D - 106 173 - -
Lele18g0094 360 SMART HOX_1 104 171 IPR001356 GO:0003677
Lele18g0094 360 ProSiteProfiles 'Homeobox' domain profile. 112 167 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0094 Lele-ChrLele18 621139 623131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0094 27 360 Wox Gene Family AT3G18010 36.719 2.33e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele18g0094 Homeodomain 7.8e-20 CL0123