Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0090 ATGAGGATACAGAGTCCGACCAGAGTCAGACCAGGATTTCACGTCCATGTTCATGCTCATTCTCCCGGAAGTCGATTTGGGACTCCGCAAAACACAGAAGCAAAGGAGCTAGAAGAAAGTGAAAGTTATTTGGCCGTGTTACCCACCAAGTTCAGCCTCTTATGGGACCGTGAAATCCTTCTCTCCCTTACCCTGCCAAAGAAAGATCCTTTTCCCCCTTCTCAATATGTGACCTCAAGAAGTTTTGTTTTCTGCTTCATAAAGAAAACTGTTCACTTAGAATCCAAGCATCTGGATCACGTTGATTGGACTGCGTTCGCAGTTTCTTTAACATTCGGTACTGTAGCTGATCGAAAAGATATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATCGATCAGAAGATGCAGCAGCATCTACTTCATCAAAAGGCCACAGGTCCAATGATGGTCCATTCTCTAAGAAGCCATCAAACTCTCGCCCCCCTCAAAGTTCTGAGCATAAACCCTTTCCCGGGATTTCGAGCTGGTTGCACTCGGTTGCTAACAGGCAGAGTCTCAGTCCTCCATCTTCGAATCTGAAAAGAGGAGAAACAGTGGAACCATCCGATTTAGTTAGCAGTGGCGTTTTGGATATTGTTTCAGATTCAGCTAGGCGTGATTCCGGGTCTAGCACTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAAGTGGCTTTGGAGATGAGTGCAAAGGAGGATCCTGAGGCAGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGTTCTTGTGGCCCTGATAATACACCAGCTGAAGTTGTGGCCTACAGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTATGATTTTTATGGGATCTTAAATGAGTCTCAGTCAACCTGTGCAAGAATGCCTTCCCTGGTGGATCTGCAAGGGACACCAACATCAGATAGTGTCACTTGGGAAGCGGTCTTGGTCAATAGAGCTGCTGATTCAAATTTGTTGAAACTTGAGCAAAAAGCCCTAGAGTTGGCCGTCAAGTCAAGGCCAAATTTTGAAGTAGTTATAAGTAACTATTTGGTGCAGAAGCTTGCCATATTAGTGGCTGACTATATGGGCGGACCGGTTACAGATCCTGAAAGCATGACAAGAGCATGGGGGAGTCTTAGTTACAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCTCAGCATCGTGCATTGTTATTTAAGGTTTTATCTGATAGCGTGGGCATCCCATGCTGCTTGGTCAAAGGACTACATTATACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGACGATGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCAGCTGGATCACATATCGAGTATGACAAATCTTTTTTTGTGGCCAGTCCTTTGTCAAGGGACCTTGATTCCTCCCGTGTAGCATCATCCAGCAGTGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTGTGTAAGCAATCCCACTACAAGTGAAGACGAATCAAAGAGCCCATTGAATGATTTCAAATGTGCCCCTAATGTGGAAAAGTTCACAGTGCAGGAAGCTCCTGGTAGACCAAATCATCCCTACTTTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTACGTAGAATGAAAGTGAAAGATGTTTCACAATATATGATCGATGCTGCGAAGGGGAATCCTCAGTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTTCAAACTTATTTTCTGAAACTTATCATCATCAGTTAGGTGCTCCAATTGTTGAGACTAACTCCAACAATGAGGAAAATGAATATGGACGGGAGAGCGAGAAACAGGTAACTCATGCTGATTCCCACCGAAATCCTGCTCAATTCTTGCCTCCTTTGCCTCCCTACAGAGCTTATCTTAAAGCAACTCCTAGCAGTCAGCTGGAGCATTCTAATCCTATAGAAGGTTTAGGGATCAACCTTCCTTTGGATCCTAGGGAAGCAGCTGGACAGCACTTACAATCACACGCAGAAGCAACTCCTATAAGATACGGTAAAAAGGTACCAGTTGCTGCAGCAGCAGCAGCTGCTGCAGCTGTTGCTTCGTCAATGGTAGTTGCTGTGGCAAAGTCCAGTACTGACTCAAATATGGAGCTTCCCGTTGCAGCGGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTTGGTAAACAATATGAACAGGGAAGTCGAAGTGATGGAGATTCAGATGGTGCTTTTTATGAGCATAAGGGTAGTGATCAGGGAGAACATAGTGTTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACAGATCAATAAGTAATGATAGCACAAAATCTGATTCTGCTCTAGATGATGTTGCTGAGTGTGAAATTCCATGGGAGGACATCACATTGGGTGAACGTATTGGGCTTGGATCATATGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTAGCTGTAAAGAGATTTTTGGATCAAGACATCTCTGGCGAATCTCTTGAGGAATTCATAAGTGAGGTCCGATTAATGAAAAGGCTCAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTAAACCTCCAAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACAGGCCTAACAATCAACTAGACGAGCGAAGACGGCTGAGGATGGCCTTAGATGCTGTAGGATTCTGTTATCTTTCTGCACGAGGAATGAACTATTTGCATAACTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTCGTTGACAAAAACTGGGTTGTAAAGGTATGCGACTTTGGTTTATCACGAATGAAGCACAGTACATTCCTTTCCTCAAGATCGACTGCAGGAACAGCAGAGTGGATGGCTCCAGAAATGTTAAGAAACGAGCCTTCAAATGAAAAGTGCGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTGTCTACGATGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCCGTGGGTTTCCAGCATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATCGCTGATATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGGCCGAGCTTTGCCGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATTATTAGTTCACAAGTGCAGAGATCAAGCGCTCAGTCATCACGAGTGGCACAAGACCCGGCTGGATAG 3471 0.4437 MRIQSPTRVRPGFHVHVHAHSPGSRFGTPQNTEAKELEESESYLAVLPTKFSLLWDREILLSLTLPKKDPFPPSQYVTSRSFVFCFIKKTVHLESKHLDHVDWTAFAVSLTFGTVADRKDMKNILKKLHIMSNRSEDAAASTSSKGHRSNDGPFSKKPSNSRPPQSSEHKPFPGISSWLHSVANRQSLSPPSSNLKRGETVEPSDLVSSGVLDIVSDSARRDSGSSTSRDPEVEEEYQIQVALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNYNALGYDDKILDGFYDFYGILNESQSTCARMPSLVDLQGTPTSDSVTWEAVLVNRAADSNLLKLEQKALELAVKSRPNFEVVISNYLVQKLAILVADYMGGPVTDPESMTRAWGSLSYSLKATLGSMVLPLGSLTIGLAQHRALLFKVLSDSVGIPCCLVKGLHYTGSDDVAMNFVKVDDGREYIVDLMADPGTLIPSDAAGSHIEYDKSFFVASPLSRDLDSSRVASSSSGIGSSSEEASDFGTFDKRNISKQIAYLGKESCVSNPTTSEDESKSPLNDFKCAPNVEKFTVQEAPGRPNHPYFHARSPSWTEGISSPAVRRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVVAPSNLFSETYHHQLGAPIVETNSNNEENEYGRESEKQVTHADSHRNPAQFLPPLPPYRAYLKATPSSQLEHSNPIEGLGINLPLDPREAAGQHLQSHAEATPIRYGKKVPVAAAAAAAAAVASSMVVAVAKSSTDSNMELPVAAAATATAAAVVATTAAVGKQYEQGSRSDGDSDGAFYEHKGSDQGEHSVLGANSEGERISDRSISNDSTKSDSALDDVAECEIPWEDITLGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDISGESLEEFISEVRLMKRLRHPNVVLFMGAVTKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAVGFCYLSARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRSSAQSSRVAQDPAG 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0090 1156 SMART serkin_6 869 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0090 1156 ProSiteProfiles Protein kinase domain profile. 869 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0090 1156 MobiDBLite consensus disorder prediction 802 856 - -
Lele18g0090 1156 MobiDBLite consensus disorder prediction 136 172 - -
Lele18g0090 1156 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 528 1140 - -
Lele18g0090 1156 SUPERFAMILY Protein kinase-like (PK-like) 852 1127 IPR011009 -
Lele18g0090 1156 ProSitePatterns Protein kinases ATP-binding region signature. 875 896 IPR017441 GO:0005524
Lele18g0090 1156 Gene3D Phosphorylase Kinase; domain 1 862 946 - -
Lele18g0090 1156 FunFam Serine/threonine-protein kinase isoform 1 860 947 - -
Lele18g0090 1156 FunFam PAS domain-containing protein tyrosine kinase family protein 947 1146 - -
Lele18g0090 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Lele18g0090 1156 CDD STKc_MAP3K-like 875 1128 - -
Lele18g0090 1156 Pfam Protein tyrosine and serine/threonine kinase 869 1128 IPR001245 GO:0004672|GO:0006468
Lele18g0090 1156 MobiDBLite consensus disorder prediction 136 176 - -
Lele18g0090 1156 Pfam Ethylene-responsive protein kinase Le-CTR1 274 479 - -
Lele18g0090 1156 PRINTS Tyrosine kinase catalytic domain signature 989 1007 IPR001245 GO:0004672|GO:0006468
Lele18g0090 1156 PRINTS Tyrosine kinase catalytic domain signature 943 956 IPR001245 GO:0004672|GO:0006468
Lele18g0090 1156 PRINTS Tyrosine kinase catalytic domain signature 1099 1121 IPR001245 GO:0004672|GO:0006468
Lele18g0090 1156 PRINTS Tyrosine kinase catalytic domain signature 1036 1046 IPR001245 GO:0004672|GO:0006468
Lele18g0090 1156 PRINTS Tyrosine kinase catalytic domain signature 1055 1077 IPR001245 GO:0004672|GO:0006468
Lele18g0090 1156 Gene3D Transferase(Phosphotransferase) domain 1 948 1140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0090 Lele-ChrLele18 595284 602238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0090 118 1148 MAP Kinase Kinase Kinase AT1G73660 62.608 0.0 1161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele18g0090 PK_Tyr_Ser-Thr 1.3e-64 CL0016