Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0088 ATGCTAGACACGATTGGCAGAGAGTTAAAACCGAAGAACGAGTTGGGTCTATTTGTGCGGTCAAGCAATCCTAGCGAGATATCAACGCAACAGAGGGAGGTGAACAACCGGAAGAGGCTTCATGATCCGGAAGATTTTATTATCTCTAACTTGAACCCTTATCCGACTGCCTACTCAGTTTTAATTCAAGTAGAAACAGAGTTTTTCTCCGAATACGGAGAGGCAAGTAGATACCAGGTCCAAGAAGTCATTGGTAAAGGAAGTTATGGCATTGTGGGTTCTGCCACTGACACTAATACTGGTGAAAAGGTTGCTATAAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACGAGGATCTTAAGAGAAATTAAACTCCTTCGATTGCTCAAACATCCTGATATAGTAGAAATTAAGCATATCATGCTTCCTCCTTCTCGACGAGAGTTCAGGGATATCTATGTCGTGTTTGAGCTGATGGAATCTGACCTCCATCAAGTAATAAAGGCCAATGATGATCTTACTCCGGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGGGGACTGAAATATATACATACTGCTAATGTGTTTCACCGGGACTTAAAGCCGAAAAATATTCTTGCTAATGCCGATTGCAAACTAAAGATATGTGATTTTGGACTTGCCCGAGTTTCATTTAATGATGCTCCATCAACTATATTCTGGACGGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCATTTTTCTCAAAATATACCGCTGCAATTGATATTTGGAGCATTGGATGCATTTTTGCAGAAATTCTCTTGGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGAACCAGTTGGATCTCATAACTGATTTACTTGGGACTCCTCCTGCTGAATCCATTGCGAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTGGCATGCGTAAAAAGAAACCAGTTCCATTTTCCCAAAAGTTTCCTAATGCTGATCCGTTGGCTCTTCGTTTGCTCCAGCGCCTGCTTGCATTTGATCCTAAGGATCGTCCAACTGCTGAAGAGGCATTAACTGATCCTTACTTCAAAGGTTTGTCGAATGTGGATCGCGAACCATCTACCCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGAAAATTGACTAAAGATGACGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTACCATCCGCAGATGCTCGAGGAATATCTTTGTGGTGGAGATCAGACCAATTTTATGTATCCAAGTGGGGTTGACCGATTCAAGCGACAGTTTGCACATCTTGAGGAGCATTGTGGCAAAGGTCAGGGTGGCGTTCCATTGCTGAGACAGCAGGCCTCCTTACCTCGAGAGCGAGTTTGTGCAGCCAAGGATGAAAAGAAGGAAGGTGTTGGAACAACGGTTGAGGGTGCTCCCAGCTGTAACGGGACAGATGCTAACTCTAACGCCAACACGCGTAGCTTGTTCAAGAGTGCCAGCATTAGTGCATCCAAATGCATAGGTGTGAAATCACGCGACAACCTCAAGGAGGATCCAATTGAGGAGGTGAATGATGAGGCAGTAGATGAGATGACAGAGAAGATGGATGTCCTCAATGCTTAA 1653 0.4332 MLDTIGRELKPKNELGLFVRSSNPSEISTQQREVNNRKRLHDPEDFIISNLNPYPTAYSVLIQVETEFFSEYGEASRYQVQEVIGKGSYGIVGSATDTNTGEKVAIKKINDVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSTIFWTDYVATRWYRAPELCGSFFSKYTAAIDIWSIGCIFAEILLGKPLFPGKNVVNQLDLITDLLGTPPAESIARIRNEKARRYLSGMRKKKPVPFSQKFPNADPLALRLLQRLLAFDPKDRPTAEEALTDPYFKGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLEEYLCGGDQTNFMYPSGVDRFKRQFAHLEEHCGKGQGGVPLLRQQASLPRERVCAAKDEKKEGVGTTVEGAPSCNGTDANSNANTRSLFKSASISASKCIGVKSRDNLKEDPIEEVNDEAVDEMTEKMDVLNA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0088 550 FunFam Mitogen-activated protein kinase 393 415 - -
Lele18g0088 550 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Lele18g0088 550 ProSitePatterns MAP kinase signature. 113 216 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele18g0088 550 SMART serkin_6 78 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0088 550 Gene3D Phosphorylase Kinase; domain 1 94 415 - -
Lele18g0088 550 CDD STKc_TDY_MAPK 77 414 - -
Lele18g0088 550 MobiDBLite consensus disorder prediction 476 498 - -
Lele18g0088 550 FunFam Mitogen-activated protein kinase 164 392 - -
Lele18g0088 550 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 76 417 - -
Lele18g0088 550 MobiDBLite consensus disorder prediction 528 550 - -
Lele18g0088 550 FunFam Mitogen-activated protein kinase 67 172 - -
Lele18g0088 550 SUPERFAMILY Protein kinase-like (PK-like) 74 374 IPR011009 -
Lele18g0088 550 Pfam Protein kinase domain 78 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0088 550 ProSiteProfiles Protein kinase domain profile. 78 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0088 550 Gene3D Transferase(Phosphotransferase) domain 1 164 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0088 Lele-ChrLele18 583710 587703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0088 61 550 MAP Kinase Gene Family AT3G18040 76.817 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele18g0088 Pkinase 1.4e-66 CL0016