Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0067 ATGGCCATGGACGTCCAATTGCATTCTTATGCTCCCTTCCTTCCATGCATAGTACTTGCCATCTCCTTCTTCTCGGTAGAATCACACAGGCACGGCAAAGCCACCACTTACTCTGACTGTAATCAAACTTACAGTTGTGGGAACATCAGCAACATCGCTTACCCTTTCTGGGGAAAGAATCGACTCCATTATTGTGGCGGCGGCGATCAATTCAGGCTCACTTGCCAGAATAATAATACCACTCTGATCACGGTAGGCCGGCAGAATTTCACGGTGGTTTCCATTAACCAGGAATTTTACTCCATGAGACTGGTCCAAACTGCTCTCTCTGTTGCTTGTCCCTGGAATTTCACTAACACTTCCTTGGATCCTGCTCTGTTCCGCTTCGATAACTTGTCAGTTCAGAACTTGACCGTATTCTACAAGTGCCCTTCTCATGTTTCAAGCCCAAGCAACATCACTTGCAATGGTGTTGCTGCTTTTTTCGCCAAGCAAGATGAGACGCGGAAATGGCAAAAATGTTCGGAATGTAAGGCCCATAATCAAATTCTAGTACAAGGTGAGATTTCCGAGGATGAAGACAAGGATGGGCTGAACAAATCTTTAAGGAATGGGTTCGTTGTTCAATATGTTGCAAACTGGGATTCCTGCTCGGCATGCAATTCATCGGGAGGAATATGTGGGACGGACATCCATCATGCTTCTCGATTTGCGTGTCATTGCCGCAACGGAATTCGTCCTTATTCCTGTCCAAAAAAAAGACGTTGGAACTGGAAAGGGAAACTCATAGCAGTTTCTTACTATTTTTCCCGCAACCCAGCTGCTGCTGCTTCTTCATTCTGTGTGATAGTCATGAGCATTGGCTTTTACTTCTATCTGCGCCGAAAGAACAATCGTCATGCCAAATCAGACAAATATGCTCAGGGTCGGACCATATCTTCCGATCCCTCCATAAAGGATGCCTTGAAAGAAAGTAAATACTTCGGAGTCCACCTCTTCACATATACCGAACTTGAAGAGGCCACTAACAAGTTTGATTCAGCCAATGAGCTTGGAGATGGGGGTTGTGGAACAGTTTATTGCGGAAAACTAGGGGATGGTCGTACAGGAACTCCTGGATACGTGGATCCAGAGTACCATCAAAGCTACCAGCTTACTGACAAGAGTGATGTGTATAGCTTTGGAGTGGTGCTCATGGAGTTGATTTCATCCATGCCTGCTATTGATATCACGAGGCATATGCATGAGATCAATTTGGCAACCATGGCTATTAACAAGATTCAAAATGGGGCTTTGCATGAGCTTGTGGACCCAACTCTTGTGTTTGAAGAAGATCCCAAGGTGAGGAAGATGATAAATGGAGTGGCAGAGTTGGCTTTCCAGTGCTTGCAGTGTATGAAAGATACGAGGCCTTGCATGGAAGAGGTGGTGGAGAGGCTGAAGGAAATAGAGGGTGATGGGATAGGCAAAACGAAAGCAGAGGAGATGGATATGTCAGCAGATCATATCGTGTTGCTGAAGAATGAAGCGCCTCCACTATCACCCGATTCAAATATGAGGAGCACAGGGACGACTCCAAATGCCAGCGGATGA 1593 0.4589 MAMDVQLHSYAPFLPCIVLAISFFSVESHRHGKATTYSDCNQTYSCGNISNIAYPFWGKNRLHYCGGGDQFRLTCQNNNTTLITVGRQNFTVVSINQEFYSMRLVQTALSVACPWNFTNTSLDPALFRFDNLSVQNLTVFYKCPSHVSSPSNITCNGVAAFFAKQDETRKWQKCSECKAHNQILVQGEISEDEDKDGLNKSLRNGFVVQYVANWDSCSACNSSGGICGTDIHHASRFACHCRNGIRPYSCPKKRRWNWKGKLIAVSYYFSRNPAAAASSFCVIVMSIGFYFYLRRKNNRHAKSDKYAQGRTISSDPSIKDALKESKYFGVHLFTYTELEEATNKFDSANELGDGGCGTVYCGKLGDGRTGTPGYVDPEYHQSYQLTDKSDVYSFGVVLMELISSMPAIDITRHMHEINLATMAINKIQNGALHELVDPTLVFEEDPKVRKMINGVAELAFQCLQCMKDTRPCMEEVVERLKEIEGDGIGKTKAEEMDMSADHIVLLKNEAPPLSPDSNMRSTGTTPNASG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0067 530 MobiDBLite consensus disorder prediction 508 530 - -
Lele18g0067 530 Pfam Wall-associated receptor kinase C-terminal 166 243 IPR032872 -
Lele18g0067 530 MobiDBLite consensus disorder prediction 514 530 - -
Lele18g0067 530 Pfam Wall-associated receptor kinase galacturonan-binding 40 105 IPR025287 GO:0030247
Lele18g0067 530 Pfam Protein kinase domain 367 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0067 530 Gene3D Phosphorylase Kinase; domain 1 310 368 - -
Lele18g0067 530 SUPERFAMILY Protein kinase-like (PK-like) 368 480 IPR011009 -
Lele18g0067 530 Gene3D Transferase(Phosphotransferase) domain 1 369 509 - -
Lele18g0067 530 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 370 527 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0067 Lele-ChrLele18 472054 475351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0067 370 530 Receptor kinase-like Gene Family AT1G25390 52.841 4.49e-43 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele18g0067 Pkinase 8.9e-08 CL0016