Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0060 ATGGCTGAGTTTACAACAGATTGGCAAGCCTTTAGATCACCTTTTCATTCCTTAGATATCGATCCAAGCATGGAACTGATAAACCAATTCACAGGGATGATGAGTCCACGTGTCTTGGACAACTCAAATCTTAATTTTCAGAGCTTCGTGCCTTTCTCCTGTGACGCCTCCTTAGGCTTCCCTGAGCCTAAATTTGAAAGAAAATTGGAGGAAAATTTTCCTAGCCTTGTCCATCATGTCAAACACAATTCTGTACCAGTTTCTTTGCCCAATTTTCCTGAGGAAACTGAAATCCATGGAAGTAAAAAGAGGAAACCAGCAGATGTGCTAGAGGCCAGTTCTACAAACTCAACTTCTGCAGTTTTACAGAGTGGGAGAAAAATGAAGAGTAGTTCCAGAACAAGTAAGAGAGCAAAAAGCAATGAAACAGGTGTGGAGAATTCAAAGGAAGTGGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAAGGTGCTTGCAGGACATTGTCCCAGGATGCTGCAAGACTATGGGTATGGCAGTAATGTTGGATGAGATCATAAACTATGTTCAATCCTTGCAGAATCAAGTCGAGTTCCTCTCCATGAAGCTTACTGCAGCAAGCAACTTCTATGACTTCAATTCAGAGACAGATGCTTTGGAAACAATGCAGGTGACAACTGTTTTTTTGCTTGGTCCGTGAATCCTTGGAATCTCTTCAAGCGAGCTTCAAGAGGGCTTCAATCAAGAGGCTTCTGATTCTATAAAGCAACCATCACGATATGCAAGAAACTTTTTGGAATATTGCTGTTTTAGGGCACTTGCTCTGTCAACACAAGTGACTGGTCATCTGTCTGATAAAATGTTCCGGCGCTTGACATATGACATGATGATAGCCTGGGAGACCCCAGATGCTGCCATCCAACCTTTACTTAATGTGGATGAGGATGTATCAGTTGGTTTACAAGCTTTCTGTCGAATAGCTCCTGCAGTTCCAATCATTGCTAATGTCATCATAAGTGAAAATATTTTTGAGGTGCTGAGTACGTCAACGGGTGGACGCCTTAAGTTCTCTGTCTACGACAAAGCAATAAGAAAAATGAGGAGTAATTCCGACTCATCTCTTCTCTCTGCCCTTCGATCATCTAGAGGTGAGAAGATTCTGGAGGTTGATGGAACGGTCACCACACAACCAGTCCTTGAACATCTAGGATTATCTGCATGGCCTGGCCGGTTAATCCTGACAGACCATGCACTTTATTTTGAAGCACATCATGTTGTAAAATATGACAAACCAAAGAAATATGATTTAGCGGATGATCTAAAACAGGTCATTAAACCTGAGATGACTGGGCCATTGGGTACGAGACTTTTTGACAAGGCAGTCTTCTATAACTCAGCATCCTTATCAGAACCGGTTGTTATGGAATTTCCAGAGTTTAAAGGTCATTCTCGCCGTGATTATTGGCTAGCTGTCATACAAGAGATTCTGCTTGTTCACAAATTTATAAACAAGTATAAAATCAAAGGAGTTGCTTGCAATGAAGTACTTTTGAAGGCTGTTTTAGGAGTTCTACGTTTACAAGCCATTCAAGATATTAGTTCGGCAATCCCTAAAGAGTTTGGGGTGCTTCTGATGTTTAATCTTTGTGATCAACTTCCAGGCGGAGACCTGATACTAGAATCCCTTGCAAATATGTCAAACTTAAGGGATTCAGATTGCACCAATGATTCTAGGGCTGGAAGTGTAGTGAATTCCATCTCAGCCTTAGACATGGTTCCTAACTTGGGATTTGTTTTTGGTACAAATACAAACACCTCCAATGAAAGCAGGCTTGCTGTGGGCGAGATATCTGTTGGAGAAATGACTTCATTGGAGAGAGAAGTTAGAGAATCAAAGAACAACTACAAAAAGGTAGAATCTGCAAAGGCAACAGTTGATGGAGTTAAAGTTGAAGGTATTGACACCAACTTGGCTGTCTTGAAGGAGTTACTTTTTCCCATAAATGAACTTGGGAAGTCTCTTAAATCTTTAGCATATTGGGATGATCCATGGAAGTCTCTAGGATTCTGTTTGGTCTTCACTTATATCATCTACAGGGGATGGCTTGGGCATGCAGTGGCACTGTTGCTGCTGTTCCTTTCAGCTTTTATGATAATGACACGATGTTTTAGCCAAGGCAGGCCTGTGGAAGAAATTAAAGTAGTAGCTCCTCCACCAATGAATACAATGGAGCAGCTGCGGGCTGTTCAGAATGCTATCACTTATGGTGAACAGTTCATACAGGATGGTAACATCATTTTGCTCAAGTTACGGGGGCTGTTTCTCTCCATTTTCCCTCAGGCGACGGAGAAGTTTGCCTTTGCTCTTGTAGCAACGGCTGTGGTTTTGGCTGCGTTACCCAGTAAATACATGGTTTTAATAGTATTTTTGGAGATATTCACAAGGTATTCACCTCCAAGAAAAGCCACCACGGAGAGATGGACCAGGAGACTCAGGGAATGGTGGTTCAGTATACCTGCGGCTCCTTTTGTGCTTGAAATAGATAAAGAAGACAAGAGGAGGAAGTAA 2622 0.4188 MAEFTTDWQAFRSPFHSLDIDPSMELINQFTGMMSPRVLDNSNLNFQSFVPFSCDASLGFPEPKFERKLEENFPSLVHHVKHNSVPVSLPNFPEETEIHGSKKRKPADVLEASSTNSTSAVLQSGRKMKSSSRTSKRAKSNETGVENSKEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQDIVPGCCKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASNFYDFNSETDALETMQVTTVFLLGPXILGISSSELQEGFNQEASDSIKQPSRYARNFLEYCCFRALALSTQVTGHLSDKMFRRLTYDMMIAWETPDAAIQPLLNVDEDVSVGLQAFCRIAPAVPIIANVIISENIFEVLSTSTGGRLKFSVYDKAIRKMRSNSDSSLLSALRSSRGEKILEVDGTVTTQPVLEHLGLSAWPGRLILTDHALYFEAHHVVKYDKPKKYDLADDLKQVIKPEMTGPLGTRLFDKAVFYNSASLSEPVVMEFPEFKGHSRRDYWLAVIQEILLVHKFINKYKIKGVACNEVLLKAVLGVLRLQAIQDISSAIPKEFGVLLMFNLCDQLPGGDLILESLANMSNLRDSDCTNDSRAGSVVNSISALDMVPNLGFVFGTNTNTSNESRLAVGEISVGEMTSLEREVRESKNNYKKVESAKATVDGVKVEGIDTNLAVLKELLFPINELGKSLKSLAYWDDPWKSLGFCLVFTYIIYRGWLGHAVALLLLFLSAFMIMTRCFSQGRPVEEIKVVAPPPMNTMEQLRAVQNAITYGEQFIQDGNIILLKLRGLFLSIFPQATEKFAFALVATAVVLAALPSKYMVLIVFLEIFTRYSPPRKATTERWTRRLREWWFSIPAAPFVLEIDKEDKRRK 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0060 873 MobiDBLite consensus disorder prediction 85 146 - -
Lele18g0060 873 Coils Coil 639 659 - -
Lele18g0060 873 CDD bHLH_AtBPE_like 150 235 - -
Lele18g0060 873 Pfam Helix-loop-helix DNA-binding domain 164 211 IPR011598 GO:0046983
Lele18g0060 873 Pfam Plant protein of unknown function (DUF639) 639 864 IPR006927 -
Lele18g0060 873 MobiDBLite consensus disorder prediction 110 129 - -
Lele18g0060 873 FunFam transcription factor BEE 3-like 157 228 - -
Lele18g0060 873 Gene3D - 157 228 IPR036638 GO:0046983
Lele18g0060 873 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 252 867 - -
Lele18g0060 873 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 210 IPR011598 GO:0046983
Lele18g0060 873 SMART finulus 166 216 IPR011598 GO:0046983
Lele18g0060 873 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 226 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0060 Lele-ChrLele18 427591 436904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0060 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 47.909 5.78e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele18g0060 DUF639 1.5e-80 CL0484