Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0056 ATGGGAGATAGAAGCGAGGTGGGCTGTTCCTTTTTCTCTCCCCTTCGCGTAAGCTTATTCAAGAGATTAATGGAGGAAACCCTACCGCCTGGGTTCAGATTCCATCCGACAGATGAAGAGCTCATCACATATTATCTGACAAGGAAGGTGTGCGATACGAGCTTCACATGCAAAGCTATAGCAGTCGTTGATCTCAACAAGAACGAACCTTGGGATCTTCCAGGAAAAGCATCGATGGGAGAGAAGGAGTGGTATTTCTTCAGCTTGAGAGACAGGAAGTACCCGACGGGGCTGAGAACGAACAGGGCGACGGAATCAGGGTACTGGAAAACAACAGGCAAAGACAAAGAAATAATGAGGGAAGGGGCTCTAGTTGGAATGAAGAAAACGCTGGTGTTCTACAAGGGCAGAGCTCCCAGGGGTGAGAAAAGCAATTGGGTTATGCATGAATATCGCCTCCACACTAACCACTCCTTTAGGGCTTCCAAGGAAGAATGGGTCGTGTGCAGGGTGTTCCAGAAAAGCTCGGCGGCGAAGAAAACACAGCAGGCGTCATCCTCACAACTGTCTCTGGACTCTCCTCCTCATCATAATACCTCTTTGCTCAATGAATTCGGTGACGGTGACCTCCCAAATTTAAACACCATCACTCCAAATTCATCATCAGCTGGCTTCACCGCCATGTCCTCCCAGATTTACAATAGCAGGGATGTTAATACAAATATGAACTTAACCATGAACTGGCCACCTGCTTCTGATCATCGGCTTCCCTCTCTCCCGTCCCTCCCATGGCCCTCTTGCTTGCTCAATCCAAACCTTTCTGTGAATTCCTTGCTTCTAAAGGCATTACAGCTTCGCACTTGTCAACAAAGAGAAATTGCAGTGACGTCGGATCATTTTGCTTCGTACATGCCGCCTCAAGGAGTTTCTCAGGTAATGGGGACTGATAGTCTCAGAATGGATGCTTCTTCCTCATCAAAGGTTTTAGATATGCCACAGCAGCAGGAGCAACCATTCAATCTGGACTCCATTTGGTGA 1038 0.4778 MGDRSEVGCSFFSPLRVSLFKRLMEETLPPGFRFHPTDEELITYYLTRKVCDTSFTCKAIAVVDLNKNEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIMREGALVGMKKTLVFYKGRAPRGEKSNWVMHEYRLHTNHSFRASKEEWVVCRVFQKSSAAKKTQQASSSQLSLDSPPHHNTSLLNEFGDGDLPNLNTITPNSSSAGFTAMSSQIYNSRDVNTNMNLTMNWPPASDHRLPSLPSLPWPSCLLNPNLSVNSLLLKALQLRTCQQREIAVTSDHFASYMPPQGVSQVMGTDSLRMDASSSSKVLDMPQQQEQPFNLDSIW 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0056 345 SUPERFAMILY NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Lele18g0056 345 MobiDBLite consensus disorder prediction 179 200 - -
Lele18g0056 345 Gene3D NAC domain 37 179 IPR036093 GO:0003677|GO:0006355
Lele18g0056 345 FunFam NAC domain-containing protein 100-like 37 178 - -
Lele18g0056 345 MobiDBLite consensus disorder prediction 179 217 - -
Lele18g0056 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 236 - -
Lele18g0056 345 Pfam No apical meristem (NAM) protein 29 153 IPR003441 GO:0003677|GO:0006355
Lele18g0056 345 ProSiteProfiles NAC domain profile. 28 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0056 Lele-ChrLele18 412029 415257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0056 24 345 NAC Transcription Factor Family AT3G18400 59.574 5.36e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele18g0056 NAM 1.3e-40 No_clan