Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0050 ATGACACACCCGCATTTTCTGTGTCTCCTTCGCTCAACGCTCTATTCAGTATTCACTCTTCATTTCTCTGTCCAGCTTAGAAGTTGGCCTGCAAAACCTGCGCCACCCAATGGCATGTTAGCTGTCTCTCCAGCCCTCTGGCCACCATGGCCGAGGCGGTTCAGTGGGAATGCCCCGATTGCACCACTCCGCCCTCCGATTTTCCTGCGGGGACTATCGGCAAAGCCGTGCCCGATGCTGGCGAAGGCTAGGAAGCGTCAGCAACTTATGAGTGGCAAGGCCGGGTTGGAGGAAGACGGCGAAGGTGGCATGGAGAAGAAGGTAGAAGGCGAAGGCAATGCTGTCTTGGAGATTCTTAGCGGGACTTTGAACTGCTCATTTTGTATGCAGTTACCCGAGAGGCCCGTCACGAAATGGATTGGACAAGGAAAACTAATATGTGCAAAGTGTCGAAGCGATATCCCCTCCGATATGGCAAGACAGCCCCGTATAAATTCTGCATTAGTTATTGCTATTCGTATGGACAAAGTATCCAAAAACAGTGGTTCTGGAGAAATTTCTAAAGTTTACCATGTTATGCATAACCAAGATAGGCCAGAGAAGGCATATCCAACAGAGCGGGCACAAAGGAATGGCATGGCAAATGCGGCTAGTGGTAAAAATTTTGTAACTGTGCCTAAGGATCATTTTGGTCCAATCCCTGCGGAGAATGATCCGGTGAGGAATCAAGGTGTGCTGGTTGGAGAATGTTGGGAAGATAGGCTTGAATGCCGACAATGGGGTGTTCACTTACCTCATGTTAGTGGCATCGCTGGACAGTCAAACTATGGTGCACAATCAGTAGTTCTTTCTGGAGGTTATGTTGATGATGAGGATCATGGAGAATATTTTCTTTACGCAGAATCCGATGCCCAGGAAATAGAGTCAAGAGAACTCGAAGTGACCAAGGGGGAGACAGATTCTGGAGCCAAAGGCAATGGCAAAAGAAAGAGAGATGGCGATGAACAAGTTTAG 1014 0.4852 MTHPHFLCLLRSTLYSVFTLHFSVQLRSWPAKPAPPNGMLAVSPALWPPWPRRFSGNAPIAPLRPPIFLRGLSAKPCPMLAKARKRQQLMSGKAGLEEDGEGGMEKKVEGEGNAVLEILSGTLNCSFCMQLPERPVTKWIGQGKLICAKCRSDIPSDMARQPRINSALVIAIRMDKVSKNSGSGEISKVYHVMHNQDRPEKAYPTERAQRNGMANAASGKNFVTVPKDHFGPIPAENDPVRNQGVLVGECWEDRLECRQWGVHLPHVSGIAGQSNYGAQSVVLSGGYVDDEDHGEYFLYAESDAQEIESRELEVTKGETDSGAKGNGKRKRDGDEQV 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0050 337 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 81 304 IPR045134 -
Lele18g0050 337 SUPERFAMILY PUA domain-like 212 302 IPR015947 -
Lele18g0050 337 SMART G9a_1 235 335 IPR003105 -
Lele18g0050 337 MobiDBLite consensus disorder prediction 310 337 - -
Lele18g0050 337 Gene3D - 211 334 IPR036987 -
Lele18g0050 337 ProSiteProfiles YDG domain profile. 240 337 IPR003105 -
Lele18g0050 337 Pfam SAD/SRA domain 242 306 IPR003105 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele18g0050 Lele-ChrLele18 370646 372383 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0050 82 324 C2H2 Transcription Factor Family AT5G39550 54.864 3.64e-85 267