Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0042 ATGTTCTGGACTTTTCTCCAGATTGGAGGATCATGGGCTTCTTTAACTGTTGCAAGAAAGGTGATGATCATCATGCTGCTGATAATGGACCCTTCGTGCCAAAGCCAAGCTATCCCCCCGGTCTCAATCGTATCGAGGCTAGAGCATGAGAATGTTGTTGAGCTTCTTGGTTATTGTGTTGATGGTGCTTTGCTGGCCCTAGCCTATGAGTATGCTCCTAAAGGAACTCTTCATGATATTCTTCACGGACGCAAAGGTATGAAGGGTGCACAACCTGGTCCAGTATTGTCATGGGCACAAAGAGTTAAAATTGCAGTGGGGGCAGCTAGAGGACTTGAATATCTACATGAAAACGCGGAGACTCCTATCATCCACCGTTATATCAAGTCTTGCAACATACTACTTTTCGAAGATGATGTTGCCAAGATTTCTGATTTTGATCTGTCAAATCAAGCCCCTGATGCCGCTGCTCGTCTCCATTCTACCCGTGTTCTTGGAACCTTCGGTTATCATGCTCCAGAATATGCCATGACGGGTCAGCTCACTTTGAAAAGTGATGTCTACAGTTTTGGAGTTATACTTCTAGAGCTCTTAACCGGACGCAAACCTGTTGATCATACACTGCCGCGAGGGCAGCAGAGCCTTGTCACCTGGGCAACGCCAAAACTGAGTGAAGACAAGGTGAAGCAGTGCGTGGATGCGAAATTGAAGGGAGAATACCCTCCAAAGGCAGTTGCAAAGATGGCTGCTGTGGCTGCAGTGTGTGTGCAATATGAAGCAGAGTTTCGGCCAAATATGAGCATTGTGGTGAAAGCTCTACAGCCTCTACTCAATCCTCGCCCTTCCGTTCACACAAAGCATTAG 864 0.4699 MFWTFLQIGGSWASLTVARKVMIIMLLIMDPSCQSQAIPPVSIVSRLEHENVVELLGYCVDGALLALAYEYAPKGTLHDILHGRKGMKGAQPGPVLSWAQRVKIAVGAARGLEYLHENAETPIIHRYIKSCNILLFEDDVAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTLKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDAKLKGEYPPKAVAKMAAVAAVCVQYEAEFRPNMSIVVKALQPLLNPRPSVHTKH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0042 287 SUPERFAMILY Protein kinase-like (PK-like) 15 273 IPR011009 -
Lele18g0042 287 PIRSF ILK 8 281 - -
Lele18g0042 287 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0042 287 Gene3D Phosphorylase Kinase; domain 1 8 76 - -
Lele18g0042 287 Pfam Protein tyrosine and serine/threonine kinase 34 273 IPR001245 GO:0004672|GO:0006468
Lele18g0042 287 FunFam pto-interacting protein 1 73 284 - -
Lele18g0042 287 Gene3D Transferase(Phosphotransferase) domain 1 77 284 - -
Lele18g0042 287 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 37 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0042 Lele-ChrLele18 302238 304054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0042 15 282 Receptor kinase-like Gene Family AT3G58690 47.955 1.15e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele18g0042 PK_Tyr_Ser-Thr 2.2e-38 CL0016