Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0041 ATGAGGCAGGCGAGGAGAGTGAAGGGGGACAATGCAGAGTGTGATCCGATCTATGGCGCGAAACAGAATAGGAGCAACCGCGTCCGAAGACGACAGACAGGGGATGTCGGCTCCTACGGTGGGAATCTGGAGAAGGAGGAGCTGGTCTTCAAGAGGCAGTTAATCTCACAGTTTGAATACCAAGAAGAAAGAGTGGCTAAGGGGTTGACTATTGTTTTAACTTTCACCACCTTGTCAAACCTGCATCATCAGCAACAAGAAAATGAAACAAGGGTTCCATCAGACTATGCCTGTAATAAGTGGTCATCATCTCTTCCTCTTGGGATAGGTCTGGTCAAACCCTATCCAACACATATGCCTACTACTATAGTGTTCCATCTTTATTTTAACAGGAATAAAGCGCTGGGTGTGGAGGAGCTTTGGAAAACAAATGCACTTGAAAAAGGTTGGTTCATTGAGGCATCTGTTCCTTTGACTATCCAGCCCAGAGTAATTTCTGATCCAAAAGGGTGGGGCACAGTGCATGGTTATGGTTATGTGTTATTGGAAATGTGCTTCGTTTTAATTAAAGTTGGTCGTGTCAAGTCCGAATCACTGAACCTTTCCCTCCGTGAAGATGAAATGAAGCCGCCAAAGATGGAACAATTTGATGTGCTTCTTGTGCTCTCTAATTCTCTCGAGCAGCACAGCAGGGTCGGTGCGTTGCTGCAACCCTCTGCTGTTCGGCGAAGAAGGGGTGGATTGGATTACGCCATTAGGCTCGTCGACAGGAGGCGTAAAGAAACGAAGGTTCTCGTTATATTTGACGTCAGCAAAATGGCATCAGGTCTAAATTCAGGACTGTCCAAGAAAACATTTGTTTTTGGTTTGAAATTGTGGGTGTTAATGGGGATAACGGTTGGTTTGTTCATTGTGATCATTCTTGTGGTGTTAATATGTCTTACTTCACGAAAGAGATCCAAAAGTGTCAATGGCAAGGTTCCCTTTAGCCATGTGTTATCAAATTCTGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCAACTGATAACCATTTGCAGAATGGTGCTTTTATGAGTCTGAATGACAAATTTAGTGACAGGGATTCTGAGAAGGTTTTGATCCAAACAAAAAATGGGGACACTAGCAGTCAATCAGGTTCATTTATTCATATGGAGAAAGATGCTCCTGGTTCTCAATCTGGTGAAGAAAGCGGTGCTATGACCATGTCTGCTTACAGGTCATCTTTGCATCCTATAACTACGCCATCACCATTGTCTGGTCTGCCTGAACTCTCTCACCTTGGCTGGGGGTACTGGTTTACATTAAGGGACCTAGAACTTGCGACAAACAGGTTTTCAAGAGACAATGTTATTGGTGAAGGTGGTTATGGAGTTGTTTATCGCGGTCAGCTAATTAATGGGAATCCAGTGGCTGTTAAGAAGCTACTCAACAATTTAGGGCAAGCTGAAAAGGAATTTAGAGTGGAGGTTGAGGCTATTGGTCATGTGCGCCATAAAAACTTGGTTCGACTTCTGGGTTATTGCATTGAAGGGACTCACAGGTTGCTGGTATATGAATACGTCAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGTCAATATGGGTATCTAACTTGGGATGCACGAATGAAAGTTCTGCTTGGCACTGCTAAAGCTCTGGCTTACTTGCATGAAGCAATTGAACCTAAAGTGGTGCACCGGGACATTAAGTCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAACTATCTGACTTTGGGCTCGCTAAGTTGCTTGGCGCTGGTAAAAGTCATATTGCTACTAGAGTAATGGGTACTTTTGGATATGTGGCTCCGGAATATGCCAACTCTGGTTTACTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTATTGCTTCTTGAATCAATTACTGGTAGGGACCCGGTGGATTATGGTCGACCAGCAGCTGAGGTGAATTTGGTAGATTGGCTCAAGATGATGGTGGGGAGTAGGCGTTCAGAAGAGGTGGTGGACCCCAACATTGAGACCAGGCCATCAACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCCGATGCTGAGAAAAGACCAACGATGAGTCAAGTCGCCCGTATGCTCGAATCGGAGGAATATCCCATACCAAGAGAGGATCGAAGATGGCGAAGAAGTCAGGCAGGAAACTTAGAGGGAGACTTCTGA 2253 0.4447 MRQARRVKGDNAECDPIYGAKQNRSNRVRRRQTGDVGSYGGNLEKEELVFKRQLISQFEYQEERVAKGLTIVLTFTTLSNLHHQQQENETRVPSDYACNKWSSSLPLGIGLVKPYPTHMPTTIVFHLYFNRNKALGVEELWKTNALEKGWFIEASVPLTIQPRVISDPKGWGTVHGYGYVLLEMCFVLIKVGRVKSESLNLSLREDEMKPPKMEQFDVLLVLSNSLEQHSRVGALLQPSAVRRRRGGLDYAIRLVDRRRKETKVLVIFDVSKMASGLNSGLSKKTFVFGLKLWVLMGITVGLFIVIILVVLICLTSRKRSKSVNGKVPFSHVLSNSEEIKEIRVDQVSTDNHLQNGAFMSLNDKFSDRDSEKVLIQTKNGDTSSQSGSFIHMEKDAPGSQSGEESGAMTMSAYRSSLHPITTPSPLSGLPELSHLGWGYWFTLRDLELATNRFSRDNVIGEGGYGVVYRGQLINGNPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKLSDFGLAKLLGAGKSHIATRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLESITGRDPVDYGRPAAEVNLVDWLKMMVGSRRSEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPTMSQVARMLESEEYPIPREDRRWRRSQAGNLEGDF 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0041 750 FunFam Putative receptor-like protein kinase 435 528 - -
Lele18g0041 750 FunFam Putative receptor-like serine/threonine-protein kinase 529 740 - -
Lele18g0041 750 SMART serkin_6 453 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0041 750 SUPERFAMILY Protein kinase-like (PK-like) 437 730 IPR011009 -
Lele18g0041 750 Gene3D Transferase(Phosphotransferase) domain 1 529 737 - -
Lele18g0041 750 PANTHER OS01G0323000 PROTEIN 276 739 - -
Lele18g0041 750 ProSiteProfiles Protein kinase domain profile. 453 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0041 750 ProSitePatterns Protein kinases ATP-binding region signature. 459 482 IPR017441 GO:0005524
Lele18g0041 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Lele18g0041 750 MobiDBLite consensus disorder prediction 1 37 - -
Lele18g0041 750 Gene3D Phosphorylase Kinase; domain 1 436 528 - -
Lele18g0041 750 MobiDBLite consensus disorder prediction 379 405 - -
Lele18g0041 750 CDD STKc_IRAK 459 725 - -
Lele18g0041 750 Pfam Protein kinase domain 454 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0041 Lele-ChrLele18 291620 300013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0041 289 727 Trihelix Transcription Factor Family AT1G70460 38.739 1.52e-88 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele18g0041 Pkinase 8.9e-48 CL0016