Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0037 ATGGTCATCTTACGACTGGGCAACTCCGAGACGGAGAAGAAAGAAGGGATGAGGCTTGCCAATTACGAAATTGGTAAAACTCTGGGCACTGGCAGTTTCGGAAAGGTGAAATTGGCCAAACATATCCATTCCCATCGACTCTTTGCCCTCAAGATCATCGACAAGACCAAGATCATCCGCCTCAATATCGCTCATCAGGTAAAGAGAGAGATAGCCACCCTCAAGCTTCTCAAGCATCCCAACGTGGTCATATTACACGAGGTTTTGGCAAGCAAAACGAAAATTTACATGGTCTTGGAGTACGTCACTGGAGGAGAATTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAATGAAGCTGAAGGTAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGCCACCATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATCTACTTGTGGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATTAGGGCCGACGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGGTCATTGCTAATAGAGGCTATGAAGGCGCAACATCAGATACATGGTCATGTGGTGTCATCTTGTTTGTAATTCTAACGGGATATCTTCCTTTCCAAGATCGGAACATTGTCGTTCTCTATCAAAAGATATCTAAAGGAGATGTCAAGATACCAAAATGGCTATCGCCTGGTGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGCCGGTATCAAAGAAGATGAATGGTGCAGGCAGGGCAATGCTCCAGCAAATCCTGAGGACGAAGAAGAGGAAGAGAAAGAGAATGTGTCTATCGACGATGAAGCCTTTTCAATCCATGACGTGCCGCACGAAGCAGAACAGAAGAGTCCTGAGTCATCAACCCTTATCAATGCATTTCAGTTGATAGCAATGTCTTCATGCTTAGACCTCTCAGGCTTCTTTGAGAAAGAGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAACCATTCAGCAAGAGATCTGATCGCAAAGATTGAAGATATTGGAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAATTGAAGGTGATAAAAGAGAATAAGGCGCACAGAAGTCTAGTGGGCATCTCGGTGGCAGCAGAGGTTTTTGAAATAAATCCATACTTGCATGTGGTAGAGTTAAGTAAATCGTATGGAGACTCTTCTCTATATGGACAGCTGTGCAAGAAACTATCAGATGATTTGGCAGTGGGCCCGAGCCTAGGGCGTGTAAAATCACAAGTGAGAGACGTCGGAGAGAAGAGTGAGAAGTCACAATCAGTCACATGA 1401 0.4483 MVILRLGNSETEKKEGMRLANYEIGKTLGTGSFGKVKLAKHIHSHRLFALKIIDKTKIIRLNIAHQVKREIATLKLLKHPNVVILHEVLASKTKIYMVLEYVTGGELFDRIASKGRLNEAEGRKLFQQLIDGVSYCHHKGVFHRDLKLENLLVDAQGNIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVIANRGYEGATSDTWSCGVILFVILTGYLPFQDRNIVVLYQKISKGDVKIPKWLSPGAQNLLRRILDPNPLTRITLAGIKEDEWCRQGNAPANPEDEEEEEKENVSIDDEAFSIHDVPHEAEQKSPESSTLINAFQLIAMSSCLDLSGFFEKEDVSERKMRFTSNHSARDLIAKIEDIGTEMGFRVQKKNGKLKVIKENKAHRSLVGISVAAEVFEINPYLHVVELSKSYGDSSLYGQLCKKLSDDLAVGPSLGRVKSQVRDVGEKSEKSQSVT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0037 466 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Lele18g0037 466 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0037 466 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0037 466 FunFam Aurora kinase A 14 105 - -
Lele18g0037 466 MobiDBLite consensus disorder prediction 277 298 - -
Lele18g0037 466 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0037 466 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lele18g0037 466 Gene3D Transferase(Phosphotransferase) domain 1 104 307 - -
Lele18g0037 466 Gene3D Kinase associated domain 1, KA1 319 441 - -
Lele18g0037 466 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 424 - -
Lele18g0037 466 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Lele18g0037 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lele18g0037 466 CDD CIPK_C 325 439 - -
Lele18g0037 466 SUPERFAMILY Protein kinase-like (PK-like) 19 318 IPR011009 -
Lele18g0037 466 FunFam Non-specific serine/threonine protein kinase 15 321 - -
Lele18g0037 466 Pfam NAF domain 322 380 IPR004041 GO:0007165
Lele18g0037 466 FunFam Non-specific serine/threonine protein kinase 321 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0037 Lele-ChrLele18 264708 268609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0037 83 440 CBL-interacting serine-threonine protein kinases AT3G17510 66.201 1.87e-169 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele18g0037 Pkinase 4.8e-68 CL0016