Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0033 ATGGAAGGAAAAGAATTGGCGGAAGCTGAGGACAGGCCACCACACACATGTGATAATAATATTACAGATGCATCACGGAAGAATGATACTGTGAGTTTCCTTGCTGCGTTTCAGTTTTCCAAAGCTTCAATTCCTAGTTTTACACTTTTGACATTGTTTAGTTATATTGATATGCAGCTGGGATCCACTATTCTCAGTTTGAGTCTGAATAACCCATCAGAAGTGAAGCCTCATAAAATTGAAGGACAGCCCGCAGCCCAATTGGGATTGCTGCGAGACAAGCTAGAGGAAATGAAGAAAGAGAATCACAATCTAAGAGCTATGCTGTGTCAGATCACTCAACATTACGCCGTTCTTCAGAATCGCCTACTTATGACGATGCAGCAGCAGCCGCAAGAACAACCGCCTCTAAAGTATCATAATTTGCAGAAAGACAATAAAGGAGATGACGAGGAGGAAGCAGCGTTACCCATGCGGCAGTTCTTGGATATCCATGAGCCTTCACCTTCAGAAAGAATCATGTGCGGCAAACCTGCATGTGAAGCTAACAGCAACAATGCAAAGAACATTGAGGATGATCAAGCATCTGATCAGGCAAATTCTTGCAGAAAAGTTAGAGTGTCCATAAGGACACGTTCGGATCTTTCTTTGATTGGTGATGGGTGCCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCATGTCCAAGGGCTTACTATCGTTGCAACTTGGGAACTGCGTGTCCAGTTCGCAAGAAGGTGCAAAGGTGTGCTAAGGACAAGAGTACTGTGATTACAACCTATGAAGGGAAGCATAATCACGCACTCCCAGCAGCAGCCACGCCCATGGCGGCCGCCACATCAGCAGCACTGAACATGTTCCTCTCTGGCTCAACTACCAGTGCACATGGAATCACACAATCAAGCTCAGGCCTCTTCTCTTCTTCATTTGCTTCCTTGTCCAACACCTCATCATGTCCAACCATAACACTAGACTTGACCCACCCCTCCAATCAATACATGCAATTCCAAATGTCTGCCTCATCAAGCCACTCCCACCGCCCATTTCCTTTTGCTTTGGATGGTTATGACACTCAACAATCTCACTGCTCATCCTCGTCTCCGCAGAAGAACGTGTCCTTGGTAGATGTCATCAGTGATGCTTTAGTTAAAGATCCTTCATTCAAGGCCGCTTTAGCTGCGTCCATTTCTTCATTTGCTGGACCCAATTCATTACAGCGTTAA 1251 0.454 MEGKELAEAEDRPPHTCDNNITDASRKNDTVSFLAAFQFSKASIPSFTLLTLFSYIDMQLGSTILSLSLNNPSEVKPHKIEGQPAAQLGLLRDKLEEMKKENHNLRAMLCQITQHYAVLQNRLLMTMQQQPQEQPPLKYHNLQKDNKGDDEEEAALPMRQFLDIHEPSPSERIMCGKPACEANSNNAKNIEDDQASDQANSCRKVRVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNLGTACPVRKKVQRCAKDKSTVITTYEGKHNHALPAAATPMAAATSAALNMFLSGSTTSAHGITQSSSGLFSSSFASLSNTSSCPTITLDLTHPSNQYMQFQMSASSSHSHRPFPFALDGYDTQQSHCSSSSPQKNVSLVDVISDALVKDPSFKAALAASISSFAGPNSLQR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0033 416 Pfam WRKY DNA -binding domain 220 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele18g0033 416 Coils Coil 88 108 - -
Lele18g0033 416 MobiDBLite consensus disorder prediction 1 17 - -
Lele18g0033 416 SUPERFAMILY WRKY DNA-binding domain 210 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele18g0033 416 MobiDBLite consensus disorder prediction 1 23 - -
Lele18g0033 416 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 85 410 IPR044810 GO:0003700
Lele18g0033 416 ProSiteProfiles WRKY domain profile. 213 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele18g0033 416 SMART WRKY_cls 218 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele18g0033 416 Gene3D WRKY domain 202 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0033 Lele-ChrLele18 246286 248433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0033 91 408 WRKY Transcription Factor Family AT4G04450 37.056 4.78e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele18g0033 WRKY 1.1e-21 CL0274