Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0027 ATGGGATTCTGTGTAGAGGAATCAATCTCAGGTTTGACATTAGGCCAGGCAATATATGAGGCTGCTCTAATAATTGCAGTTCTGAGATGGGTGTTTTGCTGGGTTTCCAAAGTCATCAATGATCGGAGGAGCCAGGCCTCATCAGAAGACTCTTCTTCTTCTTCTTCTTCATGGGTGTGCTGCCAGATGATAAGAGACAGTACTCTGACTCTTAGGACCTTTGGTGAAATGGTGGAAAGAGTGCCAGAAACGGAGGATACGTGTGCCGTGTGCTTGAACCAGTTAACAAAGGAGGATGAGGTTAGAGAGCTAATGAATTGTGACCATGCATTTCATAGGGAATGCATAGACAGATGGTTGGATCATGATCATGACAATCACAACCCCACTTGCCCGCTCTGCAGAGCTCCTTTGCTTACTTGCTATTCTTCATCTGATTCAGAATGCTCTGGTTGTATGCCACCCTCTCACCCTAGCTGGGCTGTGGAGAGGCTTCTCTATCTCTTTGGAGACGATCTGCCCCTTTGCTGA 531 0.467 MGFCVEESISGLTLGQAIYEAALIIAVLRWVFCWVSKVINDRRSQASSEDSSSSSSSWVCCQMIRDSTLTLRTFGEMVERVPETEDTCAVCLNQLTKEDEVRELMNCDHAFHRECIDRWLDHDHDNHNPTCPLCRAPLLTCYSSSDSECSGCMPPSHPSWAVERLLYLFGDDLPLC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0027 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 139 IPR013083 -
Lele18g0027 176 SUPERFAMILY RING/U-box 83 141 - -
Lele18g0027 176 Pfam Ring finger domain 86 135 IPR001841 -
Lele18g0027 176 ProSiteProfiles Zinc finger RING-type profile. 88 135 IPR001841 -
Lele18g0027 176 PANTHER RING ZINC FINGER PROTEIN-RELATED 28 172 - -
Lele18g0027 176 SMART ring_2 88 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0027 Lele-ChrLele18 221646 222176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0027 1 173 C3H Transcription Factor Family AT5G20885 48.108 4.27e-43 140