LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele18g0014	ATGGCCGCTGGTCGCTCTTTCCTTCTCTTGCCTCTCTTCCTCCTAACTCTCTCTTTCTCTCCCACTTGCCTCTCCAATTCTGAGGACGACGCCCTCCTCCAGCTCAAACGATCCTTCTCCCCGTCCTCCTCCCTCTCTTCCTGGATCCCCAATTCCTCTGCCTGCTCTGCCAAGTGGCCCGGCGTCTATTGCAACGACAACCTCGTCGTCGGTTTGCACCTCTCTAACATGACTCTCTCTGGCAACATTGACATCGATGCCCTCCTTCGCCTCCCTCACCTCCGTAGCATTGGCTTTGTCAACAACTCCTTCTCTGGTCCCATCCCCCAATTCAATAGACTCCCCACTCTCAAGGCTCTCTTCTTGACCACCACTCATTTTTCCGGCACCATCCCTTCTGATTTCTTCACTAGCTTGGCCGCCATCAAGAAAATCTTCCTCTCCGGCAATAACTTCTCCGGCGACATACCCAACTCTTTGGCCAAGCTCCCCTTGCTTGTAGAGTTGCGCCTTGAGGACAATGAATTCTCAGGAGCTATTCCGTCTTTCAGTCAACAATTTCGATCATTCAACGTTTCCAACAACCATTTGGAGGGACCTATCCCCGATGAATTGGCTAGGTTCGACGTGACATCCTTCTCTGGAAACCCAGGATTATGCGGGAAAGTAGTGGAGAAGGAGTGCAAGGAGGGCGAGCAGCAACAAGGAGCAACGAGCGGGGAGAAACAAAGTAGTAATTTGGTGAGGGTGGTAATTATGGTTATAATGGTTTTAATGGTAGTGGTGTTGCTATTTGTATTGATAAAGACGGCAAGGAGACGAGAGGGGAACAAAAATATGGGGGTCAGAAAAGACGGGAGAGGGGAAGAGATGGTGCAAGTGCATGTGCCCGGCTCGAACCATAGCAGGACATCGGGATCAACGAAGAAAGGCTCAAATTCTGTTTCAAAAAGGAATGCGATAGGGGACTTGGTGATGGTGAACGAGGAGAAGGGCGTGTTTGGGCTGTCTGATTTGATGAAGGCTGCTGCCGAGGTGTTGGGGAATGGCGGCATGGGCTCTGCTTACAAGGCCACCATGGTCAATGGATTGTCGGTGGTGGTCAAGAGGATGAGGGAGATCAACAAGATCAGCAGAGATTCCTTTGATGCCGAGATGAGACAATTCGGCAGAATCAGACACCCCAATGTTCTCACCCCTTTGGCCTACCACTATCGCAAGGAGGAGAAGCTCATTGTGTCTCAATACATTCCCAAAGGCAGTTTGTTGTATGTCTTGCACGGCGACAGAGGAAAATGCCATGGCGACCTCAACTGGCCTACCAGGTTGAAGATTGTGAAGGGAATCGCGAGTGGCTTGAGTTTCCTGCATTCTCAATTTGGATCCCATGATCTGCCCCACGGAAACCTCAAGTCAAGCAATGTTCTCTTGAGTGATGCATACGAGCCACTCCTCAACGACTTCGCCTTTCATCCGCTCATCAATCCAAACAATGCTCCCCAGGCGCTGTTTGCCTACAAAACTAAAGATTACATACAGTACCAGCAAGTGTCCCGCAAAACCGATGTATATTGCTTCGGAATCATCATCCTGGAAATCATGACCGGCAAATTCCCTTGTCAATATCATACCAACGGCAAGGGCGGCACCGATATTGTGCAGTGGGTGCTGACGGCCATCGCGGAGGGAAGAGAAGCCGAATTGATAGATCCTGAAATTCAAACTAACAAGACCGACTCCCTCAATCACATGTTACAGCTTCTCCAGATCGGGGCTAATTGCACCGAATCCAATCCTCAACAACGACTGAACTTAGCGGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTCTAA	1854	0.5005	MAAGRSFLLLPLFLLTLSFSPTCLSNSEDDALLQLKRSFSPSSSLSSWIPNSSACSAKWPGVYCNDNLVVGLHLSNMTLSGNIDIDALLRLPHLRSIGFVNNSFSGPIPQFNRLPTLKALFLTTTHFSGTIPSDFFTSLAAIKKIFLSGNNFSGDIPNSLAKLPLLVELRLEDNEFSGAIPSFSQQFRSFNVSNNHLEGPIPDELARFDVTSFSGNPGLCGKVVEKECKEGEQQQGATSGEKQSSNLVRVVIMVIMVLMVVVLLFVLIKTARRREGNKNMGVRKDGRGEEMVQVHVPGSNHSRTSGSTKKGSNSVSKRNAIGDLVMVNEEKGVFGLSDLMKAAAEVLGNGGMGSAYKATMVNGLSVVVKRMREINKISRDSFDAEMRQFGRIRHPNVLTPLAYHYRKEEKLIVSQYIPKGSLLYVLHGDRGKCHGDLNWPTRLKIVKGIASGLSFLHSQFGSHDLPHGNLKSSNVLLSDAYEPLLNDFAFHPLINPNNAPQALFAYKTKDYIQYQQVSRKTDVYCFGIIILEIMTGKFPCQYHTNGKGGTDIVQWVLTAIAEGREAELIDPEIQTNKTDSLNHMLQLLQIGANCTESNPQQRLNLAEAIRRIEEVQV	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele18g0014	617	Gene3D	Phosphorylase Kinase; domain 1	307	416	-	-
	Lele18g0014	617	MobiDBLite	consensus disorder prediction	297	315	-	-
	Lele18g0014	617	Gene3D	Ribonuclease Inhibitor	102	237	IPR032675	-
	Lele18g0014	617	Gene3D	Ribonuclease Inhibitor	22	101	IPR032675	-
	Lele18g0014	617	ProSitePatterns	Protein kinases ATP-binding region signature.	347	369	IPR017441	GO:0005524
	Lele18g0014	617	Pfam	Protein kinase domain	345	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele18g0014	617	Pfam	Leucine rich repeat N-terminal domain	26	65	IPR013210	-
	Lele18g0014	617	SUPERFAMILY	L domain-like	25	214	-	-
	Lele18g0014	617	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	12	616	-	-
	Lele18g0014	617	ProSiteProfiles	Protein kinase domain profile.	341	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele18g0014	617	Pfam	Leucine rich repeat	115	175	IPR001611	GO:0005515
	Lele18g0014	617	Gene3D	Transferase(Phosphotransferase) domain 1	417	617	-	-
	Lele18g0014	617	MobiDBLite	consensus disorder prediction	295	315	-	-
	Lele18g0014	617	SUPERFAMILY	Protein kinase-like (PK-like)	345	612	IPR011009	-
	Lele18g0014	617	FunFam	Nuclear pore complex protein NUP107	25	182	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele18g0014	Lele-ChrLele18	115394	117247	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele18g0014	6	617	Receptor kinase-like Gene Family	AT3G42880	49.449	0.0	616

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele18g0014		Pkinase	2.2e-25	CL0016