Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0002 ATGGATTTTAGTTTGATGTCACACTTTGATCGTTTCAGAAGTTCTGCCAATTCATTCCTTTCGCAATACGAACCAATTGTTCTGCTTCTCTCTCCTCTGCTTGCTGTCCTTCTCGCTCACACAATTCGATCGTTTGTTCATGTCGTTCACGATAAAGGACTTAAACCCACTCTTCTAGGACTACTCATCAACTCTATCAAATTGATCCCTGGTGTGAAGAGTTACATCAATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCCGACAGTAAATCTAAAAGGGAAGCTTGGAGAACAGAGTTACCAAGGGCAGGACTAGGGATGGAAGTTCTTGAGAAAATGAGAGATGAGAAAAGAAATGATGTGATTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATTTGATGCACACTTTTCTTTGATAAATGAGGCATGCTCAATGTTTGCGCATACCAATCCCCTGCATTTGGACGTATTTCAAAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCTGCACTTCTTGGAGGTAAAGAAAAGAGTTCGGGGGGACAAATTTGTGGAAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCACGTGACTATATGAAGTCTAAAAAAGGAATTACAAGACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAGGCTGCTCAATACTTTAACATAAAACTCTGGCGCGTTCCTGTAAACAAAAGATTTCAAGCAGATCTGAAAGCAATTCGACATCATATTAACAAAAGTACCATCTTGATTGTTGGTTCTGCCCCTGGATTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTGACCTGGCATCAAGCTTTGGAATTTGCTTTCATGTTGACCTCTGTCTTGGTGGCTTCGTATTACCTTTTGCTCGCAAGCTTGGGTACTCCATTCCACCTTTTGACTTTTCTGTTAAAGGAGTTTCTTCAATATCAGTGGACGTACACAAATATGGTTTAGCTCCTAAAGGAACAAGTATAGTACTATACAGGAACCATGACATCAGAAAGCATCAATTTGTTGCTGTTACTGAGTGGTCTGGTGGGTTGTATGTTTCTCCAACCATGGCTGGAAGCAGGCCTGGAGGTCTTATTGCTGGGGCTTGGGCAGCAATGATGTCCTTAGGGGAAGAAGGTTACATGGAGAATACAAAAGCAATTATGGACGTTTCAAAAAGAATACGGGAAGGCATAGGAGAGATTCCAGAATTATTCATCGTTGGAAGACCGGACATGACAATTGTGGCTTTTGGATCTGATGTTCTAGACATATTCGAAGTCAATGATATCATGTCATCCAGAGGGTGGCATTTGAATGCATTGCAGAGACCAAACAGCATCCATATCTGCCTGACACTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGATTTAAAGGAATCTGTGATAACCGTAAAAGAAAATCCTGGTCCAGTAATTGGAGGGTTAGCACCTATATATGGTGCGGCAGGGAAGATGCCTGATAGAGGTATGGTACAGGAATTGCTGGTAGATTTCATGGACGGTACCTGCTAG 1623 0.4202 MDFSLMSHFDRFRSSANSFLSQYEPIVLLLSPLLAVLLAHTIRSFVHVVHDKGLKPTLLGLLINSIKLIPGVKSYINAEKQKVVDKLQSDSKSKREAWRTELPRAGLGMEVLEKMRDEKRNDVIWQGKCSGTVYIGGSEFDAHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGGKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNIKLWRVPVNKRFQADLKAIRHHINKSTILIVGSAPGFPHGIIDPIEELGDLASSFGICFHVDLCLGGFVLPFARKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYMENTKAIMDVSKRIREGIGEIPELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICLTLQHLAVVEDFLRDLKESVITVKENPGPVIGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0002 540 SUPERFAMILY PLP-dependent transferases 77 501 IPR015424 -
Lele18g0002 540 FunFam sphingosine-1-phosphate lyase 1 140 404 - -
Lele18g0002 540 Gene3D - 101 537 - -
Lele18g0002 540 PANTHER - 37 540 - -
Lele18g0002 540 Gene3D - 137 404 IPR015421 GO:0003824
Lele18g0002 540 Gene3D Aspartate Aminotransferase, domain 1 109 503 IPR015422 GO:0003824
Lele18g0002 540 FunFam Sphingosine-1-phosphate lyase 1 501 539 - -
Lele18g0002 540 Pfam Pyridoxal-dependent decarboxylase conserved domain 151 445 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0002 Lele-ChrLele18 15904 33975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0002 156 500 Calmodulin-binding Proteins AT3G17760 26.287 9.26e-25 105