Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1569 ATGGTGGGTGGGGCTAGGGGGAATCTGAAAATGGCAAAGCTTGCCAACAGCATTGACCAAGTTGTAACTGCAAAGGAACTCGTGGGCGTAAACCTTGACAGCCTCGCGATCTACATCGTGGAGGAGGATATGGGTGACACCAGAGGCCTTCCGGGTTCGGGCCATGACAGCAGCAGAAAATATGGCAGCCATGCGGCCGGGAGTGTCAATCATGATCAAGTCCCAGTCTTGATCGTAGACCTCATCGGGGAGATTGCTAAGAGCAAGCTTACAATGATGGTTGCCACGGAGGGAGGGGTTGGGGGGGGAGCATGCAGGCTCAGAGCGATAGGAGGAGAGGAGAGGGCCTGCTTGGCGGAGTTGGGTATGATACTGCAGGGTGTGGGCTCGGAGGCCTGGAGCGTCCTTCAACACCATCTGCACCCCGATGAGCATGCAGGCTCAGAGCAAGGGATTGTTGAGGTATATTGGGGGAGGTGGCGTAATGGAGCAATGCACGCAGCTGGGTGGATGTTGGGGGCCTCATGGCCCCTGGGAGATGAGACCCTGCCGTTCTGCCTGCATAGCTCTTCATCTATGGCGGCTGCTTTTTCAACGGTGTCAAATGTCGGGTCTTTGCTGAGTCCACTAAGCGTTACTCAGACCAGAGTTATGCATCCTATGAATAGTGCTACTTCATTTAAGCTCACGGGATTTCCTACGCGATCGAATATATGCTCCTCATCGAGCGCCTTTGCCTGTTCGTTGCGTTTGGTGCCTTCCTCTTCTTCTTGGAATGCTTCTTCCCAACAAAGAACGCGTTTTACCATCTTTGTTCGGGCCAGTTCTGAGGAAGGACCTTTACAATCAAAAATTACTCACAAGGTGTATTTTGACATAAGTATTGGAAATCCTGTGGGGAAGCTTGCTGGAAGGATTGTGATTGGACTCTATGGTGATGATGTGCCCCAAACAGTAGAGAACTTCCGTGCCCTTTGCACAGGAGAGAAGGGCTTTGGGTACAAAGGTTCTACATTCCATCGTGTAATAAAGGATTTCATGATTCAGGGAGGGGACTTTGACAAGGGGAATGGAACTGGAGGTAAAAGTATTTATGGCCGCACATTCAAAGATGAGAATTTCAAGTTGTGTCATGTAGGACCAGGAGTTGTTAGCATGGCAAATGCAGGCCCCAACACCAATGGGAGCCAATTCTTTATATGCACCGTCAAGACACCCTGGCTGGATCAGAGGCATGTAGTATTTGGCCAAGTTTTGGAAGGTATGGACATTGTTAGGTTAATTGAATCACAGGAAACAGATCGAGGTGACCGTCCGAGGAAGAAGGTGGTTATCATTGACTCTGGTGAGCTTCCAATAGCTTGA 1365 0.5026 MVGGARGNLKMAKLANSIDQVVTAKELVGVNLDSLAIYIVEEDMGDTRGLPGSGHDSSRKYGSHAAGSVNHDQVPVLIVDLIGEIAKSKLTMMVATEGGVGGGACRLRAIGGEERACLAELGMILQGVGSEAWSVLQHHLHPDEHAGSEQGIVEVYWGRWRNGAMHAAGWMLGASWPLGDETLPFCLHSSSSMAAAFSTVSNVGSLLSPLSVTQTRVMHPMNSATSFKLTGFPTRSNICSSSSAFACSLRLVPSSSSWNASSQQRTRFTIFVRASSEEGPLQSKITHKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLCHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVVIIDSGELPIA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1569 454 CDD cyclophilin_ABH_like 287 449 - -
Lele17g1569 454 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 410 425 IPR002130 GO:0000413|GO:0003755
Lele17g1569 454 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 310 325 IPR002130 GO:0000413|GO:0003755
Lele17g1569 454 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 339 351 IPR002130 GO:0000413|GO:0003755
Lele17g1569 454 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 397 409 IPR002130 GO:0000413|GO:0003755
Lele17g1569 454 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 382 397 IPR002130 GO:0000413|GO:0003755
Lele17g1569 454 FunFam Peptidyl-prolyl cis-trans isomerase 274 454 - -
Lele17g1569 454 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 288 451 - -
Lele17g1569 454 Gene3D - 277 454 IPR029000 -
Lele17g1569 454 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 334 351 IPR020892 GO:0003755|GO:0006457
Lele17g1569 454 SUPERFAMILY Cyclophilin-like 283 451 IPR029000 -
Lele17g1569 454 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 300 450 IPR002130 GO:0000413|GO:0003755
Lele17g1569 454 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 303 448 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1569 Lele-ChrLele17 24029443 24038298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1569 304 448 U-box Gene Family AT5G67530 48.630 1.17e-33 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1569 17 24029443 24038298 Lele19g0003 19 28809 35857 hybridization