LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele17g1556	ATGGCCGCTGGTCGCTCTTTCCTTCTCCTGCCTCTCTTCCTCTTCACTCTCTCGTTCTCTCCCACTTGCCTCTCCAATTCTGAGGACGACGCCCTCCTCCAACTCAAACGATCTTTCTCCCCTTCCTCCTCCCTCTCTTCCTGGACCCCCAATTCCTCTGCCTGCTCTGCCAAGTGGCTCGGCGTCTATTGCAACAACAACCTCGTCGTCGGTCTGCACCTCTCTAACATGGCTCTCTCTGGCAACATTGACATCGATGCCCTCCTTCGCATCCCTGGCCTCCGTAGCATTGGCTTTGTTAACAACTCCTTCTCTGGTCCCATTCCCCAATTCAATAGACTCACCACCCTCAAGGCTTTCTTCTTAAACACCAATAATTTCTCCGGGCCCATCCCTTCCGATTTTTTCACTAGCTTGGCCGCCATCAAGAAAATCGGTCTCTCCGGCAATAACTTCTCCGGCGACATACCTAACTCTTTGGCCATGCTCTCCTTGCTCGTAGAGTTGAGCCTTGAGGACAATGAATTCTCAGGAGCCATTCCGTCTTTCAGTCAATACTTTCGATTGTTCAATGTTTCCAACAATCGTTTGGAGGGACCCATCCCTAATGAATTGGCTAGGTTCGGTGCAACATCCTTCTCTGGAAACCCAGGATTATGTGGGAAAGTAGTGGAGAAGGAGTGCAAGGAGGTCGGGCAGCAACAGGAGCAACAAGAAACAACGACCGAGGAGAAACAAAGTAGTAATTTGGTGAGGGTGATAACTATGGTTATAATGGTTTTAATGGTAGTGATGTTGATATTTGTATTGATAAAGACGGCAAGGAGCCGGAAGGGGAACAGAAATATGGGGGTGAGAAAAGACAGGGAAGGGGAAGAGGTGGTGCAAGTACATGTGCCCAGCTCGAACCACAGTAAGACATCAGAATCAACGAAGAAAGGCTCGAATTCGGTTCCGAAAAGGAATGCCATAGGGGACTTGGTGATGGTGAACGAGGAGAGGGGCGTTTTTGGGTTGCCTGATATGATGAAGGCTGCTGCCGAGGTGTTGGGGAACGGCGGCATGGGCTCTGCTTACAAGGCCAGCATGGGCAATGGATTGTCGGTGGTGGTCAAGAGGATGAGGGAGATCAACAAGATCAGTAGAGATTCCTTCGATGCTGAGATGAGACAATTTGGCAGAATCAGACACCCTAATGTTCTCACCCCTTTGGCCTACCACTATCGCAAGGAGGAGAAGCTCATTGTGTCTCAATACATTCCCAAAGGCAGTTTGTTGTATGTCTTGCACGGGGATAGAGGAGCATGCCATGGCGACCTCAACTGGCCCACCAGGTTGAAGATTGTAAAGGGAATCGCGAGCGGGTTAAGTTTCCTGCATTCTCAATTCGGATCCCATGATCTGCCCCACGGGAACCTCAAGTCCAGCAATATTCTCTTGAGTGATGCATACGAGCCACTCCTGAACGACTTCGCGTTTCATCCGCTTATCAATCCAGACAATGCTCCCCAGGTGCTGTTTGCCTACAAAACTCCAGATTACATACAGTACCAGCAAGTGTCTCGTAGAACCGATGTCTATTGCCTCGGAATTATCATCCTGGAAATCATGACTGGCAAATTCCCTTCTCAGTATCATAGCAACAAGGGCGGCACCGATGTTGTGCAGTGGGTGCTGACAGCCATTGCCGAAGGCAGAGAAGCCGAATTGATAGATCCTGATATTCAAACTAACAACACCGATTCCCTCAATCACATGCTGCAGCTTCTCCATATCGGGGTTAGTTGCACCGAATCCAATCCTCAACAACGACTTAACTTAGTGGAAGCCATTAGAAGGATAGAGGAGGTTCACGTCTAA	1860	0.4941	MAAGRSFLLLPLFLFTLSFSPTCLSNSEDDALLQLKRSFSPSSSLSSWTPNSSACSAKWLGVYCNNNLVVGLHLSNMALSGNIDIDALLRIPGLRSIGFVNNSFSGPIPQFNRLTTLKAFFLNTNNFSGPIPSDFFTSLAAIKKIGLSGNNFSGDIPNSLAMLSLLVELSLEDNEFSGAIPSFSQYFRLFNVSNNRLEGPIPNELARFGATSFSGNPGLCGKVVEKECKEVGQQQEQQETTTEEKQSSNLVRVITMVIMVLMVVMLIFVLIKTARSRKGNRNMGVRKDREGEEVVQVHVPSSNHSKTSESTKKGSNSVPKRNAIGDLVMVNEERGVFGLPDMMKAAAEVLGNGGMGSAYKASMGNGLSVVVKRMREINKISRDSFDAEMRQFGRIRHPNVLTPLAYHYRKEEKLIVSQYIPKGSLLYVLHGDRGACHGDLNWPTRLKIVKGIASGLSFLHSQFGSHDLPHGNLKSSNILLSDAYEPLLNDFAFHPLINPDNAPQVLFAYKTPDYIQYQQVSRRTDVYCLGIIILEIMTGKFPSQYHSNKGGTDVVQWVLTAIAEGREAELIDPDIQTNNTDSLNHMLQLLHIGVSCTESNPQQRLNLVEAIRRIEEVHV	619

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele17g1556	619	ProSiteProfiles	Protein kinase domain profile.	344	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele17g1556	619	FunFam	Nuclear pore complex protein NUP107	25	182	-	-
	Lele17g1556	619	Gene3D	Ribonuclease Inhibitor	96	237	IPR032675	-
	Lele17g1556	619	Gene3D	Ribonuclease Inhibitor	22	95	IPR032675	-
	Lele17g1556	619	SUPERFAMILY	Protein kinase-like (PK-like)	348	613	IPR011009	-
	Lele17g1556	619	MobiDBLite	consensus disorder prediction	279	320	-	-
	Lele17g1556	619	Pfam	Protein kinase domain	348	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele17g1556	619	Gene3D	Transferase(Phosphotransferase) domain 1	420	619	-	-
	Lele17g1556	619	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	11	618	-	-
	Lele17g1556	619	Gene3D	Phosphorylase Kinase; domain 1	343	419	-	-
	Lele17g1556	619	MobiDBLite	consensus disorder prediction	298	318	-	-
	Lele17g1556	619	ProSitePatterns	Protein kinases ATP-binding region signature.	350	372	IPR017441	GO:0005524
	Lele17g1556	619	MobiDBLite	consensus disorder prediction	281	295	-	-
	Lele17g1556	619	SUPERFAMILY	L domain-like	25	208	-	-
	Lele17g1556	619	Pfam	Leucine rich repeat N-terminal domain	26	65	IPR013210	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele17g1556	Lele-ChrLele17	23946416	23948275	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele17g1556	6	617	Receptor kinase-like Gene Family	AT3G42880	47.642	0.0	600

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele17g1556		Pkinase	1.8e-26	CL0016