Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1545 ATGGCTCTCTCTTCCACTTCCATCCCCACACTCTCTCTCTCCTTCCTCTCTCTCCTCATTCTCCCCCTCTCTCCTGCTTCTTCCCTCCCACTTGTCCCCTCTCACTGCCTCAAGGTTTCCTCCTCCCAGTTCGTCTCCTCCGTCTCCCAAGTCCTCCAAGTCTTGAACCAGGTCGCCTCCGTCTTGTCCCGCTTCGCCGATTTCTACGGAGATTCTCGCCTCTCCCATGCGATTTCCGACTGCCTCGATTTGCTCGACTCCTCTTCCGATGACCTTTCCTCCTCCGCTTCTGCTTTTCAATCTCCCCAAGGGAAGCATAACGGTACCGGAAACCTGAGCGCCGATTTGAGGACCTGGTTGAGCGCCGCACTGGCGAATCCAGAGACATGCAAGGACGGTTTTCAAGGAACCAACAGCATTGTGAGCGGCCTCATATCGGCTGGGCTGGGACAGGTGACCTCCTTGGTGCAGGAGCTGCTTGCCCAGGTGCACCCTGTTTCGGATCACTCCTCCAGCACCAACGGCCGCTTACCTTCGTGGATTAAACCCGGCGACCGCAAGCTCCTGCAAGCCGGTGGGGTACCAGTGGACGTGGTGGTGGCTGCAGATGCGACCGGAAATTACACAAAGGTGATGGATGCGGTGCTTGCGGCTCCTGAGTATAGCATGAAACGCTATGTCATATACGTCAGGAGCGGCGTGTACACCGAGAACGTCGAGATCAAAAAGAAGAAATGGAACCTCATGATGATTGGTGACGGCATGGACGCCACAATTATCTCCGGCAACCGTAGTTACGTCGGTGGCTGGACCACCTTCCGCACTGCCACATTTGCTGTCAGCGGCAGAGGGTTCATAGCGCGAGACATAGCTTTCCAGAACACCGCAGGCCCCGAGATGCACCAAGCAGTGGCACTGAGATCCGACTCCGACCTCTCTGTCTTCTACCGATGTGGCATTTATGGATACCAAGACAGTCTCTACACCCACACCATGCGCCAGTTCTTCAGAGAATGCAAGATCTCCGGCACCGTGGACTTCATCTTCGGCGACGCCACCGCCGTTTTCCAGAACTGCCAGCTGCTGGCAAGGAAGGGCCTGCCAAATCAGAAGAACACCATCACGGCGCAAGGCCGAAAAGACCCTAACGAGCCCTCAGGATTCTCGTTCCAGTTCTGCAACGTGACTGCAGATTCGGACCTGGTAGCCTCGATGAACAGCACGCATACGTACCTGGGAAGACCGTGGAAGACGTACTCAAGAACGGTGTTCATGCAATCGTACATGAGTGAAGTGCTGAGGCCAGAAGGGTGGCTGGAGTGGAACGGCGACTTCGCGTTGGACACACTGTACTACGCCGAGTACCAGAACTACGGGGCAGGGGCGGCGCTGGAGAAGAGAGTGAAATGGGGAGGGTACAGAGCGCTGAATGATTCGAGGCAGGCGAGTAACTTCACGGTGACTCAGTTCATTGAGGGCAATCTCTGGTTACCTTCAACGGGCGTCACTTACACAGCCGGCTTAGGGGTTTGA 1533 0.561 MALSSTSIPTLSLSFLSLLILPLSPASSLPLVPSHCLKVSSSQFVSSVSQVLQVLNQVASVLSRFADFYGDSRLSHAISDCLDLLDSSSDDLSSSASAFQSPQGKHNGTGNLSADLRTWLSAALANPETCKDGFQGTNSIVSGLISAGLGQVTSLVQELLAQVHPVSDHSSSTNGRLPSWIKPGDRKLLQAGGVPVDVVVAADATGNYTKVMDAVLAAPEYSMKRYVIYVRSGVYTENVEIKKKKWNLMMIGDGMDATIISGNRSYVGGWTTFRTATFAVSGRGFIARDIAFQNTAGPEMHQAVALRSDSDLSVFYRCGIYGYQDSLYTHTMRQFFRECKISGTVDFIFGDATAVFQNCQLLARKGLPNQKNTITAQGRKDPNEPSGFSFQFCNVTADSDLVASMNSTHTYLGRPWKTYSRTVFMQSYMSEVLRPEGWLEWNGDFALDTLYYAEYQNYGAGAALEKRVKWGGYRALNDSRQASNFTVTQFIEGNLWLPSTGVTYTAGLGV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1545 510 Pfam Plant invertase/pectin methylesterase inhibitor 53 143 IPR006501 GO:0004857
Lele17g1545 510 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 155 IPR035513 -
Lele17g1545 510 FunFam Pectinesterase 192 508 - -
Lele17g1545 510 PANTHER PECTINESTERASE 36 498 - -
Lele17g1545 510 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 165 IPR035513 -
Lele17g1545 510 CDD PMEI-like_4 52 167 - -
Lele17g1545 510 ProSitePatterns Pectinesterase signature 2. 341 350 IPR033131 -
Lele17g1545 510 SMART PMEI_2 27 162 IPR006501 GO:0004857
Lele17g1545 510 Pfam Pectinesterase 197 494 IPR000070 GO:0030599|GO:0042545
Lele17g1545 510 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 141 IPR006501 GO:0004857
Lele17g1545 510 Gene3D - 193 508 IPR012334 -
Lele17g1545 510 SUPERFAMILY Pectin lyase-like 194 507 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1545 Lele-ChrLele17 23843692 23846073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1545 12 508 Carbohydrate Esterase AT3G43270 61.047 0.0 677