Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1536 ATGGAAGGAAAAGAATTGGCGCAAGCTGAGGAGAGGCCACCACGCACATGTCATAGTAATATTACCGATGCATCGCGGAAGAAGAATGATATTGTAAGTTTCCTTGCTGTGTTTCAGTTTTCAAAAGCTTCAATTCCTGGTTTTACACTTTTGACATTGTTTAGTTATAATGATATGCAGTTGGGATCCCCTATTCTCAGTTTGAGTCTGAATAACCCGTCAGAAGTGCAGCCTCACAAAATTGAAGAGGAGCCGGCAGCCCAAATGGGATTGCTGCGAGACAAGCTAGAGGAAATGAAGAAAGAGAATCAGAATCTAAGAGCTATGCTGTGTCAGATCACTCAACATTACGCTGTTCTTCACAATCGCCTACTTATGACGATGCAGCCGCCGCCGCAAGAACAATCGCCTCTCAAGTGTCATAATTTGCAGAAAGACACTAAAGGAGATGACGAGGAGGAAGCTGCGTTACCCATGCGGCAGTTCTTGGATATCCGCGAGCCTTCACCTTCAGAAAGCATCATGTGCAGCAAACCTGCATGTGAAGCTAACTGCAATAATGCAAACAACATAGAGGATGATCAAGCCTCTGACCAGGCAAACTCTTGCAGAAAAGTTAGAGTGTCCATAAGGACACGTTCGGATCTTTCTTTGATTGGTGATGGGTGCCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCGTGTCCTAGGGCGTACTATCGTTGCAACATGGGAACTGCGTGTCCAGTTCGCAAGCAGGTGCAAAGATGTGCTAAGGACAAGAGTATTGTGATTACAACCTATGAAGGGAAGCATAATCACGCCCTCCCAGCAGCAGCCACGCCCATGGCGGCCGCCACATCAGCAGCACTGAACATGTTCCTCTCTGGCTCAACCACAAGTGCACAAGGGAGCACACAATCAAACTCAGCCCTCTTCTCTTCTTCAGCATTTGCTTCATTGTCCACAACCTCATCATGTCCAACCATAACGCTGGACTTGACCCACACCTCCAATCAACATTTGCAATTCCAAATGTCGGCCTCATCAAGCCACTCCCATCACCCATTTCCTTTTGCTTTGGATGGTTATGACACTCAACAATCTCCACAGAAGAACGTGTCCTTGGTGGATGTCATCGGTGCGGCTTTAGTTAAAGATCCTTCGTTTAAGGCGGCTTTAGCTGCGTCCATCTCTTCATTTGCTGGAGCCACTTCATTACAGCGTTAA 1239 0.4673 MEGKELAQAEERPPRTCHSNITDASRKKNDIVSFLAVFQFSKASIPGFTLLTLFSYNDMQLGSPILSLSLNNPSEVQPHKIEEEPAAQMGLLRDKLEEMKKENQNLRAMLCQITQHYAVLHNRLLMTMQPPPQEQSPLKCHNLQKDTKGDDEEEAALPMRQFLDIREPSPSESIMCSKPACEANCNNANNIEDDQASDQANSCRKVRVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAKDKSIVITTYEGKHNHALPAAATPMAAATSAALNMFLSGSTTSAQGSTQSNSALFSSSAFASLSTTSSCPTITLDLTHTSNQHLQFQMSASSSHSHHPFPFALDGYDTQQSPQKNVSLVDVIGAALVKDPSFKAALAASISSFAGATSLQR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1536 412 Coils Coil 89 112 - -
Lele17g1536 412 Gene3D WRKY domain 203 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g1536 412 Pfam WRKY DNA -binding domain 221 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1536 412 SUPERFAMILY WRKY DNA-binding domain 211 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele17g1536 412 SMART WRKY_cls 219 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1536 412 MobiDBLite consensus disorder prediction 1 21 - -
Lele17g1536 412 ProSiteProfiles WRKY domain profile. 214 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele17g1536 412 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 84 406 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1536 Lele-ChrLele17 23794656 23796659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1536 92 340 WRKY Transcription Factor Family AT4G04450 39.216 2.98e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele17g1536 WRKY 2e-22 CL0274