Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1532 ATGGTCATCTTGAGACTCGGCAACTCCCGCACGGAGAAGGATGAAGGAGTGAGGCTTGCCAATTACGAAATTGGTACAACTCTGGGCACTGGCAGTTTCGGAAAGGTGAAATTGGCCAAACATATCCATTCTCATCAACTCTTTGCTCTCAAGATCATCGACAAGACCAACATCACCCGCCTCAATATTGCCCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTCAAGCATCCCAACGTCGTCAGGTTACACGAGGTTTTGGCTAGCAAAACGAAAATTTACATGGTCTTGGAGTACGTCACTGGAGGAGAATTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAAAGAAGCTGAAGGTAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGCCACAATAAAGGAGTCTTCCACAGGGATCTTAAGCTGGAGAACGTACTAGTGGATGCCCAAGGCAAGATAAAGATAACCGACTTTGGCCTTAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGGTACTTGCCAATAGAGGTTATGAAGGCGCAACATCAGATACATGGTCATGTGGTGTCATCTTGTTTGTAATTCTAACGGGATATCTTCCTTTTGAAGATCGGAACATTGTCGTTCTCTATCAAAAGATATCTAAAGGAGATGTCCAGATACCCAAATGGCTATCGCCTGGTGCCCAAAACTGGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTCGCCAGTATCAAAGAAAATGAATGGTTCAGGCAGGACAATGTTCCAACAAATACTGGGGACGAAGAGGAGGAAGAGAAAGAGCATGTGTCTATCGATGAAGCCTTTTCAATCCATGACGTGCCGCGTGAAGCAGAACAGAAGAGTCCTGAGTCATCAACCCTTATAAATGCATTTCAGTTGATAGCAATGTCTTCATGCTTAGACCTCTCAGGCTTCTTTGAGAAAGAGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAACCATTCAGCAAGAGATCTGATCGCAAAGATTGAAGATATTGGAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAATTGAAAGTGATAAAAGAGAATGAGGCTCACAGAAGTCTAGTTGGCATCTCGGTGGCAGCAGAGGTTTTTGAAATAAATCCATCCTTGCACGTGGTAGAATTAAGTAAATCGTATGGAGACTCCTCTCTATACAGACAGCTGTGCAAGAAACTATCAGATGATTTGGCAGTGGGCCAGAGCCAAGCGCGTGTAAAATCAGAAGTGAGAGACATGGGAGAGGAGTTAGAAGTCATATGA 1386 0.4452 MVILRLGNSRTEKDEGVRLANYEIGTTLGTGSFGKVKLAKHIHSHQLFALKIIDKTNITRLNIAHQIKREIATLKLLKHPNVVRLHEVLASKTKIYMVLEYVTGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGKIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVLANRGYEGATSDTWSCGVILFVILTGYLPFEDRNIVVLYQKISKGDVQIPKWLSPGAQNWLRRILDPNPLTRITLASIKENEWFRQDNVPTNTGDEEEEEKEHVSIDEAFSIHDVPREAEQKSPESSTLINAFQLIAMSSCLDLSGFFEKEDVSERKMRFTSNHSARDLIAKIEDIGTEMGFRVQKKNGKLKVIKENEAHRSLVGISVAAEVFEINPSLHVVELSKSYGDSSLYRQLCKKLSDDLAVGQSQARVKSEVRDMGEELEVI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1532 461 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
Lele17g1532 461 FunFam Non-specific serine/threonine protein kinase 320 441 - -
Lele17g1532 461 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 426 - -
Lele17g1532 461 SUPERFAMILY Protein kinase-like (PK-like) 19 289 IPR011009 -
Lele17g1532 461 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Lele17g1532 461 Gene3D Kinase associated domain 1, KA1 318 440 - -
Lele17g1532 461 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Lele17g1532 461 FunFam Non-specific serine/threonine protein kinase 15 320 - -
Lele17g1532 461 Pfam NAF domain 321 379 IPR004041 GO:0007165
Lele17g1532 461 CDD CIPK_C 324 438 - -
Lele17g1532 461 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lele17g1532 461 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1532 461 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1532 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lele17g1532 461 Gene3D Transferase(Phosphotransferase) domain 1 104 306 - -
Lele17g1532 461 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1532 Lele-ChrLele17 23776828 23781662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1532 85 447 CBL-interacting serine-threonine protein kinases AT3G17510 65.840 3.70e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele17g1532 Pkinase 1.5e-68 CL0016