Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1525 ATGGGCTTCTTTAGCTGTTGCCAAAAAGGTGATGATCATCAGGCTCCTGATAATGGACCCTTCGTGCCAAAGCCAAGCTATCCCCCTGTCGATGCAGGGATCATAGGTGGTTATACTGGTAGACAATTTTCAACGACCACTCCACAAACTGTTAATGTTCAACCCATTGCCGTCCCTTCCATTTCAGTTGATGAAATGAAGTCTCTGACTGATAATTTTGGCACAAAATCTTACATTGGCGAGGGGGCTTACGGTAAGGTATATCATGGTGTATTAAAAAATGGGCGTCACGTGGCGATTAAGAAGTTAGATTCTACCAAGCAACCAGAAAAAGAATTTCTTGCTCAGGTCTCAATCGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTCTTGGTTATTGTGTTGATGGTGCTTTGCGAGCCCTAGCCTATGACTATGCTCCTAAAGGAACTCTTCATGATATTCTACACGGACGCAAAGGTGAGAAGGCTGCACAACCTGGTTCAGTATTGTCATGGGCACAAAGAGTGAAAATTGCAGTGGGGGCAGCTAGAGGGCTTGAATATCTACATGAAAAAGCGGAGACTCGGATCGTCCACCGTTATATAAAGTCTTGCAACATACTACTTTTCGAAGATGATGTTGCAAAGATCTCTGATTTTGATCTGTCAAATCAAGCCCCTGATGCCGCTGCTCGTCTCCATTCTACTCGTGTTCTTGGAACCTTCGGTTATCATGCTCCAGAATATGCCATGACGGGTCAGCTCTCTTCGAAAAGTGATGTCTACAGTTTTGGAGTTATACTTCTAGAACTCTTGACCGGACGCAAGCCTGTTGATCATACGCTGCCGCGAGGGCAGCAGAGCCTTGTCACCTGGGCAACGCCAAAGCTGAGTGAAGACAAGGTGAAGCAGTGCGTGGATGTGAAATTAAAGGGAGAATACCCTCCGAAGGCAGTTGCAAAGATGGCTGCTGTGGCCGCATTGTGCGTGCAATATGAAGCAGAGTTTCGGCCAAATATGAGCATTGTAGTGAAAGCTCTACGGCCTCTACTCAATCCTCGCCCTTCGGTTCACACGAAGCAGTAA 1092 0.4606 MGFFSCCQKGDDHQAPDNGPFVPKPSYPPVDAGIIGGYTGRQFSTTTPQTVNVQPIAVPSISVDEMKSLTDNFGTKSYIGEGAYGKVYHGVLKNGRHVAIKKLDSTKQPEKEFLAQVSIVSRLKHENVVELLGYCVDGALRALAYDYAPKGTLHDILHGRKGEKAAQPGSVLSWAQRVKIAVGAARGLEYLHEKAETRIVHRYIKSCNILLFEDDVAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVKLKGEYPPKAVAKMAAVAALCVQYEAEFRPNMSIVVKALRPLLNPRPSVHTKQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1525 363 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672|GO:0006468
Lele17g1525 363 Gene3D Transferase(Phosphotransferase) domain 1 149 361 - -
Lele17g1525 363 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Lele17g1525 363 Gene3D Phosphorylase Kinase; domain 1 37 147 - -
Lele17g1525 363 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Lele17g1525 363 CDD STKc_IRAK 79 352 - -
Lele17g1525 363 PIRSF ILK 36 358 - -
Lele17g1525 363 ProSiteProfiles Protein kinase domain profile. 73 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1525 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 41 358 - -
Lele17g1525 363 FunFam pto-interacting protein 1 149 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1525 Lele-ChrLele17 23757983 23759861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1525 6 350 Receptor kinase-like Gene Family AT4G02010 44.699 2.20e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele17g1525 PK_Tyr_Ser-Thr 1.2e-47 CL0016