Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1517 ATGGCCAAACTATCCAAGAACATTGGTTGTGGAGAAATTTCTAAAGCTTACCATGTTGTGCATAATCAAGATAGGCCAGAGAAGGCATATACAACAGAGCGGGCACAAAGGAATGGCATGGCAAATGCCTCTAGTGGTAAGATTTTTGTAACTGTGCCTGAGGATCATCTTATTCCAATCCCTGCCGAGAATGATCCAGTGAGGAATCAAGGTGTGCTGGTTGGAGAATGTTGGGAAGATAGGCTTGAATGCCGACAATGGGGTGTTCACCTCCCTCATGTTAGTGGCCTAGCTGGACAGTCAAAGTATGGTGCACAATCAGTTGTTCTTTCTGGCGGTTATGTTGATGATGAGGATCATGGAGAATATTTTCTTTACAGAGGAAGTGGCGGTAGAGGCCTGAGCGGTAATAAAAGAACGAACACACTGCCATCGTTTGATCAAAAGTTTGAGGAGTCTAATTTAGCTCTCAGAGTCAGTTGTTTAAAAGGTTATCCGGTTCGAGTTGTGAGGGATTCAAAGTTTGCCGGTGAGGTGAACCCGAAACTTGATGAACGTGAGGACTTGAAGGGATGCCATGATCCCATTCGGGCCTCAGGGAACTGCTATCGCACGAGGAATCCAATTCTATGA 633 0.4534 MAKLSKNIGCGEISKAYHVVHNQDRPEKAYTTERAQRNGMANASSGKIFVTVPEDHLIPIPAENDPVRNQGVLVGECWEDRLECRQWGVHLPHVSGLAGQSKYGAQSVVLSGGYVDDEDHGEYFLYRGSGGRGLSGNKRTNTLPSFDQKFEESNLALRVSCLKGYPVRVVRDSKFAGEVNPKLDEREDLKGCHDPIRASGNCYRTRNPIL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1517 210 SMART G9a_1 62 201 IPR003105 -
Lele17g1517 210 SUPERFAMILY PUA domain-like 40 176 IPR015947 -
Lele17g1517 210 Gene3D - 38 191 IPR036987 -
Lele17g1517 210 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 12 174 IPR045134 -
Lele17g1517 210 Pfam SAD/SRA domain 69 178 IPR003105 -
Lele17g1517 210 ProSiteProfiles YDG domain profile. 67 210 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1517 Lele-ChrLele17 23652242 23655212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1517 14 174 C2H2 Transcription Factor Family AT5G39550 68.944 3.48e-76 238