Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1508 ATGATCCCTTACTCAAGCAGCTTGCTTGCAAAAGTCAGAGCAAGAATTATGCAGAGACCACAGGATGAAAATTCTGACGAGGACATCAAAAGTTGGCTTAGCTTCATATATGAAGCACTTAGCTATAAGCTCAAATTAAATCCATTTGTAACTGATATGCCAAAAGCCTATCATATGCTTGTTGAGATCCATAGGCCATACCTAAAGGCCGAGCAAATTCTTGATGATTTATTTGAGAATGAGGGGAATCAAGCGGGGGAAAAAACTAATCTTGAAGTTAGTGCATGGAGTTTGGTAAGATACCAACAACCTCAGCCTCTTAACTCAGTTGTTTGGATTCACATGGCTGAGTTTACAACAGATTTGCAAGCCTTTAGATCACCTTTTCATTTCTTAGATATTGATCCAAGCATGGAACTGATAAACCAATTCAGAGGGATGATGAGTCCACGTGTCTCGGACAACTCAAATCTTAATTTTCAGAGCTTGGTGCCTTTCTCCTGTGACACCCCCTTAGTCTTCCCTGAGCCTCAATTTGAAAGAAAATTAGAGGAAAATTTTCCTAGCCTTGCCCATCATGTCAATCACAATGCTGTACCAGTTTCTTTGCCCAATTTACCCGAGGAAAATGAAATCCATGAAAGTAAAAAGAGGAAACCAACAGATGTGCTAGAGACCAGTTCTAAAAATTCAACTTCTGCAGTTATTGAGAGTGGAAGCAAAATGAAAAATAGTTCCAGAAGAAGTAAGAGAGTAAAAAGCAATGAAACAGAAGTGGAGAATTCAAAGGAAGTGGTTCATGTCAGAGCCAAAAGAGGAAAAGCTACTGATAGTCACAGTTTATCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAAGGTGCTTACAGAACATTGTCCCAGGATGCTGCAAGACTATGGGTATGGCAGTAATGTTGGGTGAGATCATAAACTATGTTCAATCCTTGCAGAATCAAGTGGAGTTCCTCTCCATGAAGCTTACTGCAGCAATCAACTTCTATGACTTCAATTCAGAGACAGATGCTTTGGAAACAATGCAGAGAGCAATGGCAGCTGAGGGAAAAGAGTTATCCAAACATGGGACAGAAGGCTGCGTAGGAATTTCTTGTTTTCAACCAACCTGGCACTTCTGA 1158 0.4016 MIPYSSSLLAKVRARIMQRPQDENSDEDIKSWLSFIYEALSYKLKLNPFVTDMPKAYHMLVEIHRPYLKAEQILDDLFENEGNQAGEKTNLEVSAWSLVRYQQPQPLNSVVWIHMAEFTTDLQAFRSPFHFLDIDPSMELINQFRGMMSPRVSDNSNLNFQSLVPFSCDTPLVFPEPQFERKLEENFPSLAHHVNHNAVPVSLPNLPEENEIHESKKRKPTDVLETSSKNSTSAVIESGSKMKNSSRRSKRVKSNETEVENSKEVVHVRAKRGKATDSHSLSERVRRGKINEKLRCLQNIVPGCCKTMGMAVMLGEIINYVQSLQNQVEFLSMKLTAAINFYDFNSETDALETMQRAMAAEGKELSKHGTEGCVGISCFQPTWHF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1508 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 274 324 IPR011598 GO:0046983
Lele17g1508 385 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 208 353 IPR024097 GO:0006355
Lele17g1508 385 MobiDBLite consensus disorder prediction 211 282 - -
Lele17g1508 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 272 335 IPR036638 GO:0046983
Lele17g1508 385 MobiDBLite consensus disorder prediction 249 282 - -
Lele17g1508 385 SMART finulus 280 330 IPR011598 GO:0046983
Lele17g1508 385 MobiDBLite consensus disorder prediction 225 242 - -
Lele17g1508 385 Gene3D - 270 333 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1508 Lele-ChrLele17 23575299 23578866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1508 165 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 50.420 1.01e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele17g1508 None None None