Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1506 ATGATCGATCTCAGAGTGGCGGCTAAGAAGCTCAAAGTTTCGATTCTTGAAGAAGGAGCCGTCGAGGACGAAACGGCAGCCAATGCTAGGCCTTGGAATTTGAGGACAAGAAGAGCTGCTTGTAAGGCTCCCCATGAAAAAGAGCGGAAGTACAATTCGTCTTCTTTGCCGGCGAAGGTCGTAGAAGCTGCGGTGACCAAGGAGAACCCGGTCAGCAAGGTGAAGAATGAGAAAACCAAATTTTCGGTTTCGTTATCGAAGGAAGAGATTGAAGAAGATTTCTTGGCTATGGTTAGGACGAGGCCTCCGAGAAGGCCTAAGACGAGGCCTAGGATTGTACAGAGGCAATTAGATACACTTTTTCCTGGATTGTGGTTGACAGAGGTCACCGCAGAATCATACAAGATAGGAAAGGAAGAAGAGGAAAAGCCTACAGCAGGCCGCTTGGCTGGTAATTTGTTGGAGGTTCATCCAGAAAATTTGTTGGTGATTCCACAATCCACAAAACTCACGTTTGATGGCACCAATTGGCATTCTGTATTCGTGCTCTTACTACAAGCCATGAGTTTTGTGTTCAGATTATGCCCCTGCTTCAACAAGAGGTTCAAGGCCAATGCTGCCTCTGATTCGCATCATCCTCAAGCAGCCGACGCTGTTGCTGATACGTGGGACCTCTTCTTCGACCTCCCCACTCTGCAGCTTGCCACCAACTTCTTCTCCGAGCTGAACCAATTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGAGTGATGCCAAATGGTCAAGAAATAGCTGTGAAGAAGCTGTCTCTGGAGTCAAGACAAGGAATTAGAGAATTTACCAATGAGGTCAAACTACTACTGAGAATTCAGCACAAGAACTTGGTTACGTTATATGGGTGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTTGATAAAAGAAAGTCACCATCTCTGGACTGGGCTACACGATTTAGAATAGTTACAGGTGTGGCGAGAGGACTTCTGTATCTGCATGAAGAGGCCCCAATAAGAATTATTCATAGAGACATCAAAGCCAGCAACATTTTGCTGGATGAGAAGTTAAATGCAAAAATTTCTGACTTTGGCCTGGCAAGACTATTTCCTGGCGATGACACTCATGTGCAGACATTTAAGATTTCTGGTACACATGGTTATATGGCTCCTGAATATGCAATGTGTGGATATTTGTCTGTGAAGACAGATGTTTTTAGTTATGGAGTCGTGGTATTGGAAATTGTTAGTGGGAGAAAAAATTATGATCGGCTACTTGGCGAAAAGGAGGCAGATCTATTGAACCATGCATGGAAGCTATATCAGGCGGGGAAGATAATGGATTTGATTGACACGAGCCTGGCCAAATACAACGTTGACGAGACAGCGATGTGCATTCATCTGGGCTTGTTGTGTTGCCAAGCAAGCATATCAGAAAGACCTGATATGAATGCCGTTCATCTGATGCTCTCAAGTGACTCGTTCACTTTGCCAAGACCTGGTAAACCTGGAATTCAAGGCCGTGTAGGACGTTGGACTACGACGTCAACCTCTGCTTTAACCAACACTGCTACTAGTGCAACCAAGGCTTCCCTGGGAAGTAGTATAGTTGAGGACTACTCTAGAAATTCTATCTCCACTTCTTCGTTTGATGAAGGAAGATGA 1722 0.4489 MIDLRVAAKKLKVSILEEGAVEDETAANARPWNLRTRRAACKAPHEKERKYNSSSLPAKVVEAAVTKENPVSKVKNEKTKFSVSLSKEEIEEDFLAMVRTRPPRRPKTRPRIVQRQLDTLFPGLWLTEVTAESYKIGKEEEEKPTAGRLAGNLLEVHPENLLVIPQSTKLTFDGTNWHSVFVLLLQAMSFVFRLCPCFNKRFKANAASDSHHPQAADAVADTWDLFFDLPTLQLATNFFSELNQLGHGGFGPVYKGVMPNGQEIAVKKLSLESRQGIREFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSPSLDWATRFRIVTGVARGLLYLHEEAPIRIIHRDIKASNILLDEKLNAKISDFGLARLFPGDDTHVQTFKISGTHGYMAPEYAMCGYLSVKTDVFSYGVVVLEIVSGRKNYDRLLGEKEADLLNHAWKLYQAGKIMDLIDTSLAKYNVDETAMCIHLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPGKPGIQGRVGRWTTTSTSALTNTATSATKASLGSSIVEDYSRNSISTSSFDEGR 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1506 573 ProSiteProfiles Protein kinase domain profile. 239 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1506 573 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 213 314 - -
Lele17g1506 573 FunFam Cysteine-rich receptor-like protein kinase 41 315 515 - -
Lele17g1506 573 Gene3D Transferase(Phosphotransferase) domain 1 315 515 - -
Lele17g1506 573 SMART serkin_6 239 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1506 573 Pfam Protein of unknown function (DUF1639) 85 134 IPR012438 -
Lele17g1506 573 Gene3D Phosphorylase Kinase; domain 1 201 314 - -
Lele17g1506 573 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 153 543 - -
Lele17g1506 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Lele17g1506 573 Pfam Protein tyrosine and serine/threonine kinase 243 459 IPR001245 GO:0004672|GO:0006468
Lele17g1506 573 CDD STKc_IRAK 245 509 - -
Lele17g1506 573 SUPERFAMILY Protein kinase-like (PK-like) 223 509 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1506 Lele-ChrLele17 23558806 23570764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1506 215 524 Receptor kinase-like Gene Family AT4G21410 53.503 5.12e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele17g1506 PK_Tyr_Ser-Thr 6.5e-47 CL0016