Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1505 ATGGCGACGCCATTGACGGGACTGCAGCATTTGGAAGGAAGAGGAGTGGCCGTGCTTTCCAATTCTGCTAACAAGGTCGATTCCTCCTCGCCGTCGACTTCGGCCTCCAGTGGTGTCTTGAACTACCCTGAATTGGACTCTCCAATCTTGATTTTCTTACTCTCTCATAAGGCGATTCGAAATGAGCTTGATGCTCTTCACCGGTTAGCTATGGCATTTGCAACGGGCAACCACTCTGATATTCATCCCCTCTTCGAGCGCTATCATTTCGTTAGATCCATTTATAGACACCACTCCAATGCTGAAGATGAGGTGATTTTTCCTGCTCTTGATATACGTGTGAAGAATGTGGCCCATACATATTCTCTTGAACAGAAGGGTGAAAGCAATCTCTTTGATCATCTATTTGAGCTGCTAAATTCTACCATCCAAAATGATGAAAGTTTTTCAAAGGAGTTAGCATCTTGCACGGGAGCTCTGCAGACATCAGTTAATCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCATTGCTTATTGAGAAATTCTCAATAGATGAACAGGCATCTCTTGTTTGGCAGTTTCTGTGCAGTATTCCTGTCAATACAATGACAGAATTTCTTCCCTGGCTCTCAACATCTGTATCATCAGATGAATCTAATGATCTGCAGAAGTGCTTAAGCAAGATAGTACCAGAGGAAAAGCTTCTTCGAAAGGTTATTTTCACTTGGATGAATGGTAGAGGTGGTGTTGACACAGTTGAAAGTTGTGAACATCATTCTCATGTTCAGTGTAGTCCTAGCCCATTAACCCATCTGATTGGGAAAGCAATCTGTCCTTGTGAGTCTGCAACAACTGGGAAAAGGAAACATCCTGAATCTATTCTAGATGTTTCTGATGTCACTGGGACACATCCTATTGATGAAATATTGCTCTGGCATAATGCGATCAAAAAAGAGTTGAGTGAGATAGCGGTGGAGACGAGAAAGATACAACTTTCTCGAAATTTTACTAATTTGTCAGCTTTTAATGAAAGGTTTCAGTTTATTGCTGAAGTTTGCGTATTTCACAGTATTGCTGAGGACTGGGTTATATTTCCTGCTGTAGATGGCGAACTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTCCGGTGTTTGATTGAAGGCATTCAGAGTGAAGGAGCAACATCCAATTCAGAAGCTGAATTTTATTCCAAGCTATGCTCATATGCTGATCATATTATGGAAACCATACAGAGGCACTTCCGCAATGAAGAAGTTCAGGTTCTTCCCCTTGCTCGGAAGCACTTCTGCTTCAAAAAACAACGTGAACTTTTGTACCAAAGCTTGTGTATGATGCCCCTAAAATTGATTGAACGTGTCCTGCCCTGGTTGGTGGGATCATTAACTGAAGATGAAGCAAAGATGTTTCTGAAAAACATGCAACTGGCAGCTCCCCCAACAGATTCTGCTTTAGTCACACTCTTCTGTGGTTGGGTTTGCAAGGCTCGTAAGGAGGGTCTGTGCTCGTCTTCAAGTGTATTAGGCTGCTGTCCTGCTAAAAATCTTACTGATATGGAAGAAAATGGTTTCCAGTCATCCTGTTCTTTTGCTTCTGCATTATCTGCTAATGGTTGCTCAGTATCAGCTGAATCAGATGACAACAAAAGACCAGTCAAGCGAAACATATTGGAGTTCTGCAAGAATGGAGAGGTGCCTCAAACTTTAGAAACTGAAAGTATCCAAAAGCAATGTTGTAGTGCCCGGACTTGTTGTGTGCCAGGTTTAGGAGTAAGCAGTAATAATTTGGGGCTGAGTCCTTATTCCACTACCAAGTCCATACGCTCCTTATCTTTCAGCTCTTCTCCCCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGATAACAACTCTTGTGATGCTAGCTCTGCAGTCAGACCGATTGATACTATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGATTGTGATGAGACAATTCTTCGTCAATTTACTGGAAGATTTCGCCTTTTATGGGGTTTACATAGAGCTCACAGTAATGCTGAAGATGACATAGTTTTTCCAGCATTGGAATCCAAAGAGGCACTTCATAATGTGAGTCATTCATACACGCTGGATCATAGGCAGGAAGAAAAATTATTCGAGGATATATCCTGTGTTCTCTCTGAGCTTTCTGTTCTTCATGAAAGTTTGCTGACACTCAATATGTCAGAGGATACAAGTAATTTTGAAACTTCTGACGCCACTGTGAGTGATAATATAGGAAAATATAATGAGCTAGCTACTAAACTTCAAGGGATGTGCAAATCTATACGAGTGACCCTGGATCAGCATATTTTCAGAGAAGAGCTTGAGCTTTGGCCATTGTTTGGGAGACATTTCACCGTGGAAGAACAAGACAAGATAGTTGGCCGGATAATTGGAACTACTGGTGCTGAAGTACTCCAGTCAATGTTACCATGGGTAACTTCCGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCTACTAAGAACACCATGTTCAACGAATGGCTTAATGAATGCTGGAAAGAGAGTTCATCGCCTATCCTGCTGACTGAAACATCAGAGCATGGCATGTACCAAAGAGGTACTGAATATCAAGAAAGCTTGGACCTGAATGATCAGATTTTTAAGCCAGGTTGGAAAGATATATTTCGTATGAATCAAAGTGAGCTTGAGTCGGAGATACGGAAGGTTTATCGGGATTCTACTCTTGAACCAAGGAGAAAGGCATATCTTGTGCAAAATCTAATGACCAGTCGCTGGATTGCTTCCCAGCAGAAGTTACCCAAAGCTGTAGGTGGAGAATCCTCTAATGGTGAAGAAATAGAAGGAACATCACCATCATTTCGGGACCTGGAGAAAAAAGAATTTGGATGTGAGCATTATAAGAGAAACTGCAAACTTCGAGCTGCATGTTGTGGCAAGTTATTTACATGCAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGGAAAACAACATCAGAAATGATGTGCATGCGCTGCTTGAATATACAAGCAGTTGGGCCCATATGCATGACCCCTTCATGTGATGGACTTTCAATGGCAAAATATTATTGCAACATCTGCAAATTTTTTGACGATGAAAGGAATGTATATCATTGCCCATTTTGCAATGTATGCCGTGTTGGGAGAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGTCTGGGGATTAAATCAGCATCTCACAAATGCTTGGAGAAAAGTTTGGAAATGAACTGTCCAATATGTTGTGACTTCTTATTCACATCCAGTGCTACAGTCAGAGCTTTACCTTGTGGCCATTACATGCATTCAGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCAATTTGCAGCAAGTCACTGGGAGATATGGCAGTTTACTTTGGTATGCTCGATGCTTTGTTGGCTGCTGAGGGGCTTCCTGAAGAGTACAAGGACCGGTATCAGGATATACTGTGCAATGATTGTGATCGAAAGGGCTCTTCACGCTTCCACTGGTTATATCACAAATGTGGTTTTTGTGGCTCATATAATACCCGCGTGATCAAGTCTGAGGCAACAAATTCCATCTGCCACTAG 3735 0.4161 MATPLTGLQHLEGRGVAVLSNSANKVDSSSPSTSASSGVLNYPELDSPILIFLLSHKAIRNELDALHRLAMAFATGNHSDIHPLFERYHFVRSIYRHHSNAEDEVIFPALDIRVKNVAHTYSLEQKGESNLFDHLFELLNSTIQNDESFSKELASCTGALQTSVNQHMAKEEEQVFPLLIEKFSIDEQASLVWQFLCSIPVNTMTEFLPWLSTSVSSDESNDLQKCLSKIVPEEKLLRKVIFTWMNGRGGVDTVESCEHHSHVQCSPSPLTHLIGKAICPCESATTGKRKHPESILDVSDVTGTHPIDEILLWHNAIKKELSEIAVETRKIQLSRNFTNLSAFNERFQFIAEVCVFHSIAEDWVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCSYADHIMETIQRHFRNEEVQVLPLARKHFCFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPPTDSALVTLFCGWVCKARKEGLCSSSSVLGCCPAKNLTDMEENGFQSSCSFASALSANGCSVSAESDDNKRPVKRNILEFCKNGEVPQTLETESIQKQCCSARTCCVPGLGVSSNNLGLSPYSTTKSIRSLSFSSSPPSLNSSLFIWETDNNSCDASSAVRPIDTIFKFHKAIRKDLEYLDVESGKLSDCDETILRQFTGRFRLLWGLHRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDISCVLSELSVLHESLLTLNMSEDTSNFETSDATVSDNIGKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESSSPILLTETSEHGMYQRGTEYQESLDLNDQIFKPGWKDIFRMNQSELESEIRKVYRDSTLEPRRKAYLVQNLMTSRWIASQQKLPKAVGGESSNGEEIEGTSPSFRDLEKKEFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKTTSEMMCMRCLNIQAVGPICMTPSCDGLSMAKYYCNICKFFDDERNVYHCPFCNVCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKSLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEGLPEEYKDRYQDILCNDCDRKGSSRFHWLYHKCGFCGSYNTRVIKSEATNSICH 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1505 1244 CDD Hr-like 308 437 - -
Lele17g1505 1244 Pfam Zinc-ribbon 1175 1232 IPR039512 -
Lele17g1505 1244 CDD Hr-like 51 177 - -
Lele17g1505 1244 CDD RING-H2_Pirh2 1127 1170 - -
Lele17g1505 1244 Gene3D nmb1532 protein domain like 46 197 - -
Lele17g1505 1244 Gene3D nmb1532 protein domain like 308 455 - -
Lele17g1505 1244 SUPERFAMILY RING/U-box 1125 1180 - -
Lele17g1505 1244 SUPERFAMILY Zinc hairpin stack 1065 1121 IPR037275 -
Lele17g1505 1244 FunFam Zinc finger protein BRUTUS 649 879 - -
Lele17g1505 1244 ProSiteProfiles Zinc finger CTCHY-type profile. 1064 1127 IPR017921 -
Lele17g1505 1244 Pfam Ring finger domain 1127 1169 IPR001841 -
Lele17g1505 1244 ProSiteProfiles Zinc finger CHY-type profile. 992 1061 IPR008913 GO:0008270
Lele17g1505 1244 ProSiteProfiles Zinc finger RING-type profile. 1128 1170 IPR001841 -
Lele17g1505 1244 CDD Hr-like 656 814 - -
Lele17g1505 1244 Pfam Hemerythrin HHE cation binding domain 305 439 IPR012312 -
Lele17g1505 1244 Pfam Hemerythrin HHE cation binding domain 654 815 IPR012312 -
Lele17g1505 1244 Pfam Hemerythrin HHE cation binding domain 51 179 IPR012312 -
Lele17g1505 1244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1121 1172 IPR013083 -
Lele17g1505 1244 SMART ring_2 1128 1169 IPR001841 -
Lele17g1505 1244 Gene3D - 1199 1240 - -
Lele17g1505 1244 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 697 1239 - -
Lele17g1505 1244 SUPERFAMILY CHY zinc finger-like 992 1055 IPR037274 GO:0008270
Lele17g1505 1244 FunFam Zinc finger protein-related isoform 1 1123 1172 - -
Lele17g1505 1244 Pfam CHY zinc finger 999 1074 IPR008913 GO:0008270
Lele17g1505 1244 Gene3D nmb1532 protein domain like 649 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1505 Lele-ChrLele17 23545722 23553518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1505 1 1243 C2H2 Transcription Factor Family AT3G18290 66.297 0.0 1667