Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1486 ATGAAGGAGGAATTGAGTGTAAACAAGAAAATGTCAGATTCGTCTAAGAAAGTGGCCGATAGGTATCTCAAGCGTGAAGTCCTCGGTGAAGGTACCTATGGAGTAGTATACAAAGCTATTGATACCCAGACAGGACAAACAGTTGCAATTAAGAAAATCCGGCTTGGCATGCAGAAGGAAGGGGTAAATTTTACTGCTCTTAGAGAGATTAAAACACTCAAAGAGCTCAAAGATCCAAATATTATTGAGTTAATCGATGCTTTCCCACATAAAGGCAATTTGCATCTAATCTTTGAATTCATGGAGACGGATCTTGAAGCTGTTATAAGAGACCCGAATATTTTTCTTTCACCAGCGGATATAAAATCATACCTTCAAATGACTCTGCAAGGTCTCATGATATTAGTACTTTTAGTTAAAGGCTTGGTTCCTGCAGATTTTGGATGGTTAGAGTTTGCAAAATTGGAAGGGGATGTGCCATAG 483 0.3872 MKEELSVNKKMSDSSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGMQKEGVNFTALREIKTLKELKDPNIIELIDAFPHKGNLHLIFEFMETDLEAVIRDPNIFLSPADIKSYLQMTLQGLMILVLLVKGLVPADFGWLEFAKLEGDVP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1486 160 SUPERFAMILY Protein kinase-like (PK-like) 18 135 IPR011009 -
Lele17g1486 160 Pfam Protein kinase domain 24 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1486 160 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Lele17g1486 160 Gene3D Phosphorylase Kinase; domain 1 1 136 - -
Lele17g1486 160 ProSiteProfiles Protein kinase domain profile. 22 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1486 160 SMART serkin_6 22 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1486 160 PANTHER CELL DIVISION PROTEIN KINASE 20 134 - -
Lele17g1486 160 FunFam Cyclin-dependent kinase D-1 13 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1486 Lele-ChrLele17 23460001 23462663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1486 11 132 Core Cell Cycle Gene Families AT1G18040 81.148 2.28e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Lele17g1486 Pkinase 6.5e-24 CL0016