Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1474 ATGCTTCCTCCTTCTCGACGAGAGTTTAGGGATATCTATGTCGTGTTTGAGCTGATGGAATCTGACCTTCATCAAGTAATAGAGGCAAATGATGATCTTACTCCGGAGCATCACCAATTTTTCTCGTACCAACTTCTTCGGGGACTGAAATATATACATACTGCTAATGTGTTTCACCGTGACTTAAAGCCGAAAAACATTCTTGCTAATGCCGATTGCAAACTAAAGATATGTGATTTTGGGCTCGCTCGAGTTTCATTTAATGATGCTCCATCCACTAAATTCTGGACGGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCGTTTTTCTCAAAAGTAAGCCTTTCTTCATCTTCCATATGGGCCACTTCCCCCTTTTTCTGTATTGATAGTTTCTGTCTTTCTGATTATACCGCTGCAATTGATATTTGGAGCATTGGATGCATTTTTGCAGAAATTCTCTTGGGGAAGCCATTGTTTCCTGGAAAAAATGTGGTGAACCAGTTGGATCTCATAACTGATTTACTTGGGACTCCTCCTGCTGAATCCATTGCGAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTGGCATGCGTAAAAAGAAACCAGTTCCATTTTCCCAGAAGTTCCCTAGTGCCGATCCATTGGCTCTTCGTTTGCTCCAGCGCCTGCTTGCATTTGATCCTAAGGATCGTCCAACTGCTGAAGAGGCATTAACTGATCCTTACTTCAAAATTTTATCGGATGTGGATCGCGAACCATCTACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGAAAATTGACTAAAGACGACGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCTCATATGCTCGAGGAATATCTTTGTGGTGGAGAGCAGACCAGTTTTATGTATCCAAGAGAGCGAGTTTGTGCAGCCAAGGATGAAAAGAAGGAAGGTGTTGGAACAACTGTTCAGGGTGCTCCCAGCTCTAATGGGACAGATGCTAACTCTAATGCCAACACGCGTAGCTTGTTCAAGAGTGCCAGCATTAGTGCATCCAGACTTGTAACAGAGAAACCCACCAAAGCCTCAATTTTTGGATCTATGGGTTGCGTTTCTTCCAATCTCCTCAACCACGACGATGAGTTTTCTCAACTGGGAAGCTCAGCACTTGGTCACCACATCGTCTCCCTCACCTCCACCACCTATGGCCTCCTCAACCTCGACCCACCTCCTTCCACCCCACCTTCTCGCTTCACCTTAGGTTCCATTTTCCCCCGCCCGCTCTCCGAACCCCGTCCTCTCCGTTCCGAACCAGAGGTCATTAATTCTTGGGAGCTCATGGCAGGACTCGACACCGACAGTTTCCGCTTCTCTCCTCTGCCTCCACCCAAACCCTTCACCGTCAAAGACCCATCCTTCAATAAAGAGAACAGCAACCCCAACGGGCTCAATCTTCAAAAGGAGCCCCCCCGGTTTTTGAAGCCGTCGAGAGAGGAAATCAAGAAACCCGGTCCGATCAATCCCTCACTGGATCGTTTCGAGAAGATATGCCCACCAAACGGGGACGACAGAGTGGTGATCTATACGACGACGCTGAGAGGGGTACGCAAGACATTCGAGGATTGCAATGAGGTGAGAAGAGCAATAGAAGGGTTGGGAGTGGTAATATGCGAGCGAGACGTATCGATGGACTGTGGGTTTAAAGAAGAGCTAAAGGAGCTGTTGAAGGGGAAGGGGAGGGAGGGAATGGTGCCTCCAAGAGTGTTTGTAAAGGGAAGGTACATTGGTGGGGCTGAAGAGGTGTTGAGACGAGCAGAAGAAGGATTTCTCTGGAAGCTTCTAGAAGGGATGCCCAGAAAAAAAGAAGGGATTGTTTGTGAGGGGTGTGGAGATATGAGGTTCTTGCCATGTTTTAATTGTCATGGGAGCTGTAAGATGGTGATGGTGGTGAAGGAGAAGGGAAGGACCGTTGTGGTGAGGTGCCCCGACTGTAATGAAAATGGGTTAGTGCTGTGCCCTATCTGTTGCTGA 2058 0.4689 MLPPSRREFRDIYVVFELMESDLHQVIEANDDLTPEHHQFFSYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSTKFWTDYVATRWYRAPELCGSFFSKVSLSSSSIWATSPFFCIDSFCLSDYTAAIDIWSIGCIFAEILLGKPLFPGKNVVNQLDLITDLLGTPPAESIARIRNEKARRYLSGMRKKKPVPFSQKFPSADPLALRLLQRLLAFDPKDRPTAEEALTDPYFKILSDVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPHMLEEYLCGGEQTSFMYPRERVCAAKDEKKEGVGTTVQGAPSSNGTDANSNANTRSLFKSASISASRLVTEKPTKASIFGSMGCVSSNLLNHDDEFSQLGSSALGHHIVSLTSTTYGLLNLDPPPSTPPSRFTLGSIFPRPLSEPRPLRSEPEVINSWELMAGLDTDSFRFSPLPPPKPFTVKDPSFNKENSNPNGLNLQKEPPRFLKPSREEIKKPGPINPSLDRFEKICPPNGDDRVVIYTTTLRGVRKTFEDCNEVRRAIEGLGVVICERDVSMDCGFKEELKELLKGKGREGMVPPRVFVKGRYIGGAEEVLRRAEEGFLWKLLEGMPRKKEGIVCEGCGDMRFLPCFNCHGSCKMVMVVKEKGRTVVVRCPDCNENGLVLCPICC 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1474 685 Gene3D Transferase(Phosphotransferase) domain 1 19 111 - -
Lele17g1474 685 Gene3D Glutaredoxin 532 631 - -
Lele17g1474 685 MobiDBLite consensus disorder prediction 331 347 - -
Lele17g1474 685 Pfam Glutaredoxin 534 604 IPR002109 -
Lele17g1474 685 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 287 - -
Lele17g1474 685 CDD GRX_GRX_like 533 681 - -
Lele17g1474 685 SMART serkin_6 5 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1474 685 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1474 685 ProSiteProfiles Glutaredoxin domain profile. 522 630 - -
Lele17g1474 685 MobiDBLite consensus disorder prediction 323 347 - -
Lele17g1474 685 Gene3D Phosphorylase Kinase; domain 1 2 18 - -
Lele17g1474 685 Gene3D Transferase(Phosphotransferase) domain 1 138 273 - -
Lele17g1474 685 Gene3D Phosphorylase Kinase; domain 1 274 296 - -
Lele17g1474 685 FunFam Mitogen-activated protein kinase 19 141 - -
Lele17g1474 685 FunFam Mitogen-activated protein kinase 274 296 - -
Lele17g1474 685 Pfam Protein kinase domain 9 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g1474 685 SUPERFAMILY Protein kinase-like (PK-like) 9 251 IPR011009 -
Lele17g1474 685 MobiDBLite consensus disorder prediction 480 494 - -
Lele17g1474 685 MobiDBLite consensus disorder prediction 475 498 - -
Lele17g1474 685 SUPERFAMILY Thioredoxin-like 525 624 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1474 Lele-ChrLele17 23409577 23415338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1474 1 364 MAP Kinase Gene Family AT1G73670 64.578 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Lele17g1474 Pkinase 2.4e-43 CL0016