Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1466 ATGGTGGGACATAACGACGGTGGTGAGATTAACGTGGTTGATCACCCATTCAGTGGAAGAAAGCTCAGGCCTCTCATTCCGAGGCCAGTGACTTCTTCCGATTATACTTCATCCACAACTCCCCCTTGCCTAAGAAGTATTCACGGCTCCGATTTGTTTACACAATATCACGATCTGACATCAACGACTCCTCCAGTCGTGGTGAGCTCAAGGTGGAATCCTACTCCAGAACAGCTAAGAGCCCTTGAAGAATTGTATCGGCGAGGAACAAGAACGCCATCTGCCGAGGAAATTCAACATATCACCGCACAGCTGCAGAGATTTGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGTCAGAAACGGCGCCGTCAGATGGAATCGGCTCCCAGTGATTTTGATAGTCTAGAGAAGGAAGACTTAGGAATCTGTGCCAATACCAAGAGCAACAAAAGCAGTGGCCGCATCAGAGCGAAGAACGGAATCACAGCAAAGAAGAAACTTGATGGAAAGGAATGCCACGTAAGAGCGAGAGCAATTGACCCAAAGCTCATTAAGGCACATGATCTCAGCTTCTTTATATCGCCTCACAGTGAAGGCACGGTCATCCACTTTAACAGTGTCAGTGATGACCAAGTTGATCACTGCGGTGAACCCCAAACCCTTGAACTTTTCCCTCTCAGGGGTGGCGATGGCAGTGATAACGACAACCATGAAGAGTGTGAGATTTCAGTTTCTGCATCAATGAATGCCAACTTGACCCCATGCCAGTTCTTTGAGTTCCTTCCCTTGAAGAATTAA 828 0.4662 MVGHNDGGEINVVDHPFSGRKLRPLIPRPVTSSDYTSSTTPPCLRSIHGSDLFTQYHDLTSTTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITAQLQRFGKIEGKNVFYWFQNHKARESQKRRRQMESAPSDFDSLEKEDLGICANTKSNKSSGRIRAKNGITAKKKLDGKECHVRARAIDPKLIKAHDLSFFISPHSEGTVIHFNSVSDDQVDHCGEPQTLELFPLRGGDGSDNDNHEECEISVSASMNANLTPCQFFEFLPLKN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1466 275 SUPERFAMILY Homeodomain-like 70 137 IPR009057 -
Lele17g1466 275 Pfam Homeodomain 70 127 IPR001356 GO:0003677
Lele17g1466 275 Gene3D - 68 131 - -
Lele17g1466 275 SMART HOX_1 67 134 IPR001356 GO:0003677
Lele17g1466 275 FunFam WUSCHEL-related homeobox 4 69 136 - -
Lele17g1466 275 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 60 270 IPR044555 GO:0003700|GO:0099402
Lele17g1466 275 CDD homeodomain 71 127 IPR001356 GO:0003677
Lele17g1466 275 ProSiteProfiles 'Homeobox' domain profile. 75 130 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1466 Lele-ChrLele17 23367786 23369717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1466 2 138 Wox Gene Family AT3G18010 55.862 5.35e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele17g1466 Homeodomain 6.6e-19 CL0123