Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1455 ATGGATAACGGCGATCCCAATTTCAGTGAAGAAGATGCCAAGAGCTACGCTCTTAGCGGCAGGATTATGCTTAGCGCCGTCGTTATTTTATTCTTCATCGTCATTTTTATGATTTGCCTTCACCTGTACGTTCGCTGGTTTCACTTACAAGCTCGCCGCCGTCATCGCCGTCGCCGTCGCTCTCACATCGTATTCTACGCGGACTCCGCCACTCCTGCTGTGGCCTCGCCGTGTGGTCTTGATTCGTCTCTACTTATGTCTCTCCCTGTCTTTGTCTACTCTTCTAACACTCACCCGGAACAGATTGAATGCCCAGTCTGCTTGTCCGAGTTCGAAGGGGGCGAGACGGGTCGAGTTTTGCCCAAATGCAATCACACTTTTCACGTTGACTGCATCGACATGTGGTTCCAGACCCACTCCACATGCCCTATTTGCAGGTCTGCTGTTGAGCCCGCACCGGCGGACACCAACAGTCCTGAAGTGGTGATAACTGTGGGTAAACCTGAAATTCCTGAACCGGGGTCGACTTCTGGGCTGTGTTCGGAGTGTCAGCACGAAGGGAGGGATGAAACCCAAAGCAGCCACACGGTTTGTTCTTCATCATCTTCTTCGATCGGGTTAGGGCGGAAGCCATCATCACTAGTGGGTGTGACCTTGGAGGTGCCCAAGAGGGGTGAGAGCTTCGGAGACGAGCAGGCGTGCGAGTCGCCGTCGACTCAGTCATCGTTCAGGTCGCCGATGAGTCGCATGCTGTCGTTCAAGAGGATGCTCAGCAGAGACCGGAAAGCAAACCTTTTGCCATCAGCAGGGAGCAGTACTGCGGGGGGCAGCGGCTCTGGGAACGAGTTAGAGAAGGAAGGAGGAGGACGAGAGGGGACACAATGA 885 0.5424 MDNGDPNFSEEDAKSYALSGRIMLSAVVILFFIVIFMICLHLYVRWFHLQARRRHRRRRRSHIVFYADSATPAVASPCGLDSSLLMSLPVFVYSSNTHPEQIECPVCLSEFEGGETGRVLPKCNHTFHVDCIDMWFQTHSTCPICRSAVEPAPADTNSPEVVITVGKPEIPEPGSTSGLCSECQHEGRDETQSSHTVCSSSSSSIGLGRKPSSLVGVTLEVPKRGESFGDEQACESPSTQSSFRSPMSRMLSFKRMLSRDRKANLLPSAGSSTAGGSGSGNELEKEGGGREGTQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1455 294 MobiDBLite consensus disorder prediction 265 279 - -
Lele17g1455 294 FunFam RING-H2 finger protein ATL3 71 151 - -
Lele17g1455 294 MobiDBLite consensus disorder prediction 232 248 - -
Lele17g1455 294 SMART ring_2 104 145 IPR001841 -
Lele17g1455 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 152 IPR013083 -
Lele17g1455 294 Pfam Ring finger domain 103 146 IPR001841 -
Lele17g1455 294 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 168 - -
Lele17g1455 294 CDD RING-H2_EL5_like 103 146 - -
Lele17g1455 294 MobiDBLite consensus disorder prediction 226 294 - -
Lele17g1455 294 SUPERFAMILY RING/U-box 84 154 - -
Lele17g1455 294 MobiDBLite consensus disorder prediction 193 209 - -
Lele17g1455 294 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Lele17g1455 294 MobiDBLite consensus disorder prediction 167 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1455 Lele-ChrLele17 23304976 23305860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1455 5 291 Rapid Response to Elicitors AT3G16720 50.489 3.06e-72 223