Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1439 ATGCAGATGCCAGGTAGGGGCAATGGCGATGGAGTAAATAACAACCAACAAGCTATAAAGTGTTCAGATCAAAGAATTTCCTCTCGCATTCATTTCATGCGCATGGACCCTCAATACCCTAAACCTCGATCCTATGCACCACAGATGGAGATGACAATTCCCCCCTCCCAGCTTTCCGACAACGATCGGAGCAGCTCCGAACTGCGAGCTCTCGATTGCAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACATCGTGCTCCATGCAATGGGTTCCCCTTATCACCTCCATCGCCTTATCCTTTCTCGGAGTTCTTACTTCAGAAATATGCTTCATGGTCCCTGGAAAGAAGCTAGTGCTCCTGTTGTGACCCTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATCACAATGGCTTTGGCTTACCTCTACGGGCACCACCCTAAGCTTAGTGATAGTAATGCATTTCGTGTTCTTGCTGCCGCATCCTTTCTTGACCTCCAGGACTTATGTGCAATATGTACAGACTTCATTATATCCGTGCTGTGGACTTCAAATTTCTTGGCTTATCAGGTATTTGCAGAAAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAAATGCTTGTTGGGGCTACCTCTGTCAAAGTGGCGGCATGGAGTTGAAAGAGGTGCTCCCGAAACTTTCTTCTCAAACATTACATGCATTACTAACCTCTGATGAACTGTGGATACCAAGTGAAGAGAAACGGTTTGAATTGGCATTATACACATTCCTGGCAAAAAATGCTCACTGGAAAGCAGAGCATCCTGAGCAAGCAAGTTCTGGTTCTGAGACTGCGACTAATACCCATTCTGATTCTGATAATATTAAGGGGAAAAATGGAGCTGATAACTTCACAAGTAATTGGTTGGGAACTGATCTAGGGCGTCTGAATATTAAAAGTGATGTAGAGGACACTGTTGATCATAATCTGCAAGTTGAGCTTGCAGACGGTGTGGCACACTTCAGCAATGAGGATTCTGATTCTCATCAATTGGCACAAGCAACATCATTTGCTGGTTCATCAAATTTGGAACCTAGATATGCTTGCAACATGGAAGGGCCTTCGTCAATCAGTAATTTGTTGTCAGAAAAAGATGGGACCGGAACATCATGTTCTTATGTTGAGATGCCTCTCACTGCGGGAGCAACTGGAGTGGCTATTGAAGGGCCATCTGAGGAAGGGTCAAATTCTTCCTGCAATGGCCTCACATCCAGTGATTGGGGAAGATACAGTGTGCCTCTTTTTCCATGGGGAGGCCGGGTAGTTGGTGGAAGGCAGCTTAAAGCTCACTCTAAAGGAAAGTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGGCGCTTCTGAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCCGATACATGCAAAGCTTGTTGCCTTGTGAGTGTAGCATGCACTTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTACCATTCCTAGTTACTACATGCAAGAACACAAGCAGAATAATAATTCTGGGAACATGGGAAACATATATGTTGCTGAGTCTTCTCAAAGTGAAGGAAGTGGCATATTTAGACCTGTACAAGTACATGTTAGAGGTGCTATCGATGGGCTTGCAGGTATTGGTCGAGGAACTACATTTGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGCATGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCGGCTAATGATGATTCAGAGACACAAGCTGACCACAACGTAGACATGTCTGGAGATGGGTTGACAGCTTTGGTTGGGCTAAGCCAGGGAGGGAGTAGTGGAATCAATGCACATGGAGAGATGACACAAAGGGGATATGAGACTGGCATGCGAAGCAGGATCTCTGGAACTGCTGCTGGAGGCCCAAGTACTGATGGCATACCCATGCAAATGTTAGAGACACCAGAACATGCCATAGGAATAGAATGGGAGCATACTAGTAGCTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCTCCCTTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAAGTGTTCTATGCTGGTTCTCTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCTCAGGGACGGAGAACTCTCGGATTGTTTCTTCACCGTCGAAAAGCAGAGATTGCTGATTTACATAGAAAGGTGCACATGTATGTGGATTCTCGCGAAAAGGTGACTGCTCGCTATCAGTTGGTTTGCCCATCAAAAAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAGACGGGCACTCTTCTACCCAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTATTTAACGAGCTTGCCGATCTTCTGCAAAACGGGGCCCTTCGAATAATTGCTGTAGTGCAGCTCGTTTAA 2652 0.4525 MQMPGRGNGDGVNNNQQAIKCSDQRISSRIHFMRMDPQYPKPRSYAPQMEMTIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDIVLHAMGSPYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCAICTDFIISVLWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEKRFELALYTFLAKNAHWKAEHPEQASSGSETATNTHSDSDNIKGKNGADNFTSNWLGTDLGRLNIKSDVEDTVDHNLQVELADGVAHFSNEDSDSHQLAQATSFAGSSNLEPRYACNMEGPSSISNLLSEKDGTGTSCSYVEMPLTAGATGVAIEGPSEEGSNSSCNGLTSSDWGRYSVPLFPWGGRVVGGRQLKAHSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKACCLVSVACTCRQPFAFSQGVTIPSYYMQEHKQNNNSGNMGNIYVAESSQSEGSGIFRPVQVHVRGAIDGLAGIGRGTTFVPTSASPPTRFVFSRMPFGVGNRNYPQSAANDDSETQADHNVDMSGDGLTALVGLSQGGSSGINAHGEMTQRGYETGMRSRISGTAAGGPSTDGIPMQMLETPEHAIGIEWEHTSSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEIADLHRKVHMYVDSREKVTARYQLVCPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFNELADLLQNGALRIIAVVQLV 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1439 883 MobiDBLite consensus disorder prediction 284 308 - -
Lele17g1439 883 SUPERFAMILY POZ domain 87 190 IPR011333 -
Lele17g1439 883 MobiDBLite consensus disorder prediction 281 308 - -
Lele17g1439 883 SMART BTB_4 93 193 IPR000210 GO:0005515
Lele17g1439 883 ProSiteProfiles BTB domain profile. 93 163 IPR000210 GO:0005515
Lele17g1439 883 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 36 883 - -
Lele17g1439 883 Pfam BTB/POZ domain 87 190 IPR000210 GO:0005515
Lele17g1439 883 Gene3D Potassium Channel Kv1.1; Chain A 59 226 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1439 Lele-ChrLele17 23236109 23241745 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele17g1439 BTB 2.9e-14 CL0033