Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1434 ATGTTAAAACCCGAAGTCCGAACCCGCCCAAAACAAGATACTAGGTTTTCGTCATATAAGATTCGATCATCTTCAAAGCTCGTTGTCTCTCACCGGCACGCAGCCAAATTCTTAAGCCTTGATAATATCACAGTTCCTTTAACGAAGAATTCTTTATACGCTCCAAAACAAAAGATGCAGAACGACGAGGGACAGATTACTGAGCTTTACATTCCAAGGAAATGCTCCGCAACAAATAGACTGATAACTGCAAAGGACCATGCGTCCGTGCAGATCAACATTGGGCATCTGGATGAGAACGGTATCTACAATGGTCATTTCTCCACATTTGCTATGTGCGGTTTTATTCGTGCCCAGGGGGATGCTGACAGTGCATTAGATCGTCTGTGGCAGAAGAAGAAAGCTGAAGTCAAGCAACAGTAG 423 0.4397 MLKPEVRTRPKQDTRFSSYKIRSSSKLVVSHRHAAKFLSLDNITVPLTKNSLYAPKQKMQNDEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGIYNGHFSTFAMCGFIRAQGDADSALDRLWQKKKAEVKQQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1434 140 Pfam Ribosomal protein S21e 59 134 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele17g1434 140 Gene3D - 55 139 IPR038579 -
Lele17g1434 140 ProSitePatterns Ribosomal protein S21e signature. 69 77 IPR018279 GO:0003735|GO:0005840|GO:0006412
Lele17g1434 140 PANTHER 40S RIBOSOMAL PROTEIN S21 59 139 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele17g1434 140 FunFam 40S ribosomal protein S21 59 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1434 Lele-ChrLele17 23212050 23213837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1434 59 139 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 8.96e-51 154