Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1431 ATGGCTGTCTTCGTGATATCAAGCATGCTTAGTCCTGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGTAATAGTAAAAGAAGTATACCTTGTGAGGTTTCCAAAGGCTATAACATTCTACCTCAAGTTCACAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTGAGTGCAAATGCTACGTTAGCCAACACAAACATCTGCAATGGTTTGATAGGAGAAGAAATACTTCCAACTTGGGACTCTCCTAATTCATTTCGTAAGGTACCCTCTTCTCCAAGTCTTTCTAGGTTGGATATATTATCATCTTCTCTCCACAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGCGATACGCTTGATTATGACTCTTGTACATTAAAATCCATGAGTGCTCCTTCCAGGAGTGAAGGTTTTCTTAATGCTATGGAAGTCCATGCAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTTTGTGCAGTTTATGATGGCTTTAATGGTAGAGATGCTGCCGACTTTCTGGCCGGTACTCTGTATGACACCATTGTCTCTAACTTTAATATGTTGTATTGGGAATTGGAGCCAGATTCCATCAAAGCTTCTAATGATGTGGGTTTGGGTGGATTCTATAAGTTGGATGATAGTCTCATTGTTCATGAGGAGAAATCTCTGTCAAAACTCAAGGGAAACAACAATCCTTATCTTGGCTTTTTGGCAAACAATAACCTATCTGCTAAGGTAGGAGCGCCTTATAAATCATTTTCAGATGGGGTACTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGGACGACCTGATTTAGTTTCTGTTGGATCTTGTGTTTTACTAGTGCTTCTTCACGGGAATGACTTGTACACGCTTAATTTAGGTGACAGCAAAGCTGTATTGGCAACATGTAACACAAGAGGCAAACTTCAAGCTATCCAGCTCACAGAAAGCCATACGGTTGAAAATGACGCTGAAAGAGCTCGACTTCTGGCTGATCACCCCGATGATCCTAAACCCATCATAGGAGGAAAAGTGAAAGGGAAACTGAAGGTTACTCGGGCTTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCACTGATGGGAATCCTTCGAGTCCGAGATCTTATAAGCCCTCCATATATTTCCTCTCAACCATCACTGAATGTGCATAAGATCTCAAACTCTGATCAATTTGTGATAGTAGCAAGTGATGGCTTATTTGACTTCCTCACTAATGATGAGGTTGTGGAGTTTGTTGAGTCTTATATCTCAAGCAATCCATTCGGCGATCCAGCTAAGTTTCTTATCGAGCAGCTTGTAGCAAGAGCAGCCAATTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCAGGGAGGAGACGGAGGTATCATGATGACGTAACCGTGATTGTGGTCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAATTTGCATTTAA 1575 0.4178 MAVFVISSMLSPEGELKISFGYQCNSKRSIPCEVSKGYNILPQVHRTSSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNLSNLSCSPSTPSDTLDYDSCTLKSMSAPSRSEGFLNAMEVHAAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTLYDTIVSNFNMLYWELEPDSIKASNDVGLGGFYKLDDSLIVHEEKSLSKLKGNNNPYLGFLANNNLSAKVGAPYKSFSDGVLDSLERSLSQVENDFLYMVEQEMEGRPDLVSVGSCVLLVLLHGNDLYTLNLGDSKAVLATCNTRGKLQAIQLTESHTVENDAERARLLADHPDDPKPIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILRVRDLISPPYISSQPSLNVHKISNSDQFVIVASDGLFDFLTNDEVVEFVESYISSNPFGDPAKFLIEQLVARAANSAGFSMEELMNVPAGRRRRYHDDVTVIVVILGMNHRTSKASICI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1431 524 ProSiteProfiles PPM-type phosphatase domain profile. 144 511 IPR001932 -
Lele17g1431 524 SMART PP2C_4 138 509 IPR001932 -
Lele17g1431 524 Gene3D - 126 519 IPR036457 -
Lele17g1431 524 Pfam Protein phosphatase 2C 289 477 IPR001932 -
Lele17g1431 524 PANTHER PROTEIN PHOSPHATASE 2C 125 509 IPR015655 GO:0004722|GO:0006470
Lele17g1431 524 SUPERFAMILY PP2C-like 157 511 IPR036457 -
Lele17g1431 524 CDD PP2Cc 157 511 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1431 Lele-ChrLele17 23202811 23204785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1431 12 524 PP2C-type Phosphatase Gene Family AT3G16560 62.042 0.0 599